Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2385 109 5e-19 seq490 96.9 3e-15 >seq2385 Length=44452 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| || | ||| | ||| | || | ||| || || || || |||||||| || Sbjct 34042 GCCTCCACGAAGACGGAGAACAAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGC 33983 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| || ||||||||||| |||||| |||||||||| ||||| || ||||| Sbjct 33982 CAGGGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGAGG 33923 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || || || ||||| |||||| || | | || | || || | | || || Sbjct 33922 AATTCCCTCCTTGTCCTGAATTTTGGCCTTAACATTGTCGATTGTATCGGATGACTCGAC 33863 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| ||| | ||||| ||||||||||| ||||| || |||||||| Sbjct 33862 CTCAAGAGTGATGGTCTTCCCGGTCAATGTCTTTACAAAGATTTGCAT 33815 >seq490 Length=81643 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137214 TGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACC 137273 ||| || || || || |||||||| || || || | || ||||| ||||| || Sbjct 58571 TGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATCCTCGAGCTGTTTGCC 58512 Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 137333 |||| |||||||||||||||| || ||||| || || || ||||| |||||| || Sbjct 58511 AGCAAAGATCAGACGTTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATTTTGGCCTT 58452 Query 137334 TAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 137393 | | || | || || | | || || |||| ||| | |||||||| |||||||| Sbjct 58451 GACATTATCAATTGTATCAGATGACTCGACCTCAAGAGTGATGGTCTTGCCTGTCAATGT 58392 Query 137394 TTTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 58391 CTTGACGAAGATTTGCAT 58374 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 137214 TGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTAC 137272 ||||||||| || || ||||||||||| | |||| || | |||||||| || || | Sbjct 59255 TGTAGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGTCCA-TCTTCGAGCTGCTTCC 59197 Query 137273 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTT 137332 | ||| | || || | |||||| || || || ||||| || ||||| ||| ||| | Sbjct 59196 CTGCAAATATGAGTCTTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGCCT 59137 Query 137333 TTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATG 137392 | | | || | ||||||| | ||| || |||| || | ||||| || ||||| | Sbjct 59136 TGACGTTGTCAATGGTGTCTGACGATTCAACCTCAAGGGTAATAGTCTTACCAGTCAAGG 59077 Query 137393 TTTTTACGAATATTTGCATA 137412 | || || ||||| |||||| Sbjct 59076 TCTTAACAAATATCTGCATA 59057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488297981455200