Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 145 1e-29
seq490 136 8e-27
seq220 136 8e-27
seq5010 122 2e-22
seq263 107 4e-18
>seq2385
Length=44452
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || |||||||| ||||| || || ||||||| || ||| || ||||| | |||
Sbjct 34624 TGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGCCCATCTTCCAACTGT 34565
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || |||||||| || || || ||||||||||| || || |||||||| |||||||||
Sbjct 34564 TTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGAATCTTT 34505
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| || ||||| || || || || | || || || | || ||||| ||||| |||
Sbjct 34504 GCCTTGACATTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATCGTTTTGCCAGTC 34445
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| |||||| ||||| ||||||||
Sbjct 34444 AGCGTCTTCACAAAGATCTGCAT 34422
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| ||||| | ||| || || || || ||||| || || || ||||
Sbjct 34041 CCTCCACGAAGACGGAGAACAAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 33982
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || |||||||| ||||||||||| || | || || || |||||
Sbjct 33981 AGGGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGA 33922
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||| || ||||| || || || ||||| || || ||||| | || ||
Sbjct 33921 ATTCCCTCCTTGTCCTGAATTTTGGCCTTAACATTGTCGATTGTATCGGATGACTCGACC 33862
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || ||||| || ||||| ||||||||||| || |||||
Sbjct 33861 TCAAGAGTGATGGTCTTCCCGGTCAATGTCTTTACAAAGATTTGCAT 33815
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||||| || || || || || ||||| || || | ||| | | |||
Sbjct 35092 CGAAGAACCAGATGCAGGGTCGACTCCTTTTGAATATTGTAGTCTGCTAGGGTGCGCCCG 35033
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || || || || || ||||| || || || ||
Sbjct 35032 TCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCTTTG 34973
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| ||||||||||| || || || ||||| || || || ||| || || | || ||
Sbjct 34972 TCCTGAATCTTTGCCTTGACGTTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTAATG 34913
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| |||| ||||| ||||| |||||||||
Sbjct 34912 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATT 34877
>seq490
Length=81643
Score = 136 bits (150), Expect = 8e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || |||||||| ||||| || || ||||||| || | | ||
Sbjct 59272 CGGAGGACAAGGTGGAGTGTAGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGTCCA 59213
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || || ||||| || |||||||| || || || || || || |||||
Sbjct 59212 TCTTCGAGCTGCTTCCCTGCAAATATGAGTCTTTGCTGGTCCGGGGGAATGCCCTCCTTG 59153
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| ||||||||||| || || || ||||| || || | ||| || || | || ||
Sbjct 59152 TCCTGAATCTTTGCCTTGACGTTGTCAATGGTGTCTGACGATTCAACCTCAAGGGTAATA 59093
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||||||||||||
Sbjct 59092 GTCTTACCAGTCAAGGTCTTAACAAATATCTGCAT 59058
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||| || || || || ||||| || || || |||| || | | ||
Sbjct 58588 CGGAGAACAAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCA 58529
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || ||||| ||||||||||| || | ||| || || ||||| || || |||||
Sbjct 58528 TCCTCGAGCTGTTTGCCAGCAAAGATCAGACGTTGCTGGTCCGGAGGGATACCCTCCTTG 58469
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| ||||| || || || ||||| ||||| |||||| | || || || | ||| ||
Sbjct 58468 TCCTGAATTTTGGCCTTGACATTATCAATTGTATCAGATGACTCGACCTCAAGAGTGATG 58409
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||||||||| ||||| || || || |||||
Sbjct 58408 GTCTTGCCTGTCAATGTCTTGACGAAGATTTGCAT 58374
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||||| || || || || || ||||| || || | ||| | | ||
Sbjct 59728 CGAAGAACCAGATGCAGGGTTGACTCCTTTTGAATATTGTAGTCTGCTAGGGTGCGCCCA 59669
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || |||||||| || || ||||| |||||||| || || || ||
Sbjct 59668 TCCTCAAGCTGCTTCCCCGCAAAGATGAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTG 59609
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| ||||| ||||| || ||||| ||||| || || || ||| || || | |||||
Sbjct 59608 TCCTGAATTTTTGCCTTGACATTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTTATG 59549
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| || |||||||||||
Sbjct 59548 GTCTTGCCAGTCAGAGTCTTGACGAATATCTGCAT 59514
Score = 122 bits (134), Expect = 2e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || || || || || || |||| || | | |||
Sbjct 58816 CGAAGCACAAGGTGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGACCA 58757
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | ||| || || |||||||| || | || || || || || ||||| |||||
Sbjct 58756 TCCTCCAATTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTG 58697
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| ||||| || || || || | ||| ||
Sbjct 58696 TCCTGGATCTTGGCCTTGACATTGTCAATAGTATCTGAAGACTCAACCTCAAGAGTGATT 58637
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||||||||| ||||| ||||| ||||||||
Sbjct 58636 GTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 58602
>seq220
Length=196394
Score = 136 bits (150), Expect = 8e-27
Identities = 160/214 (75%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657
||| || ||||| || |||||||| ||||| || || || |||| ||| | | || ||
Sbjct 149014 CAGCACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGCCCATC 149073
Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717
|| || || || ||||| ||||| || || || ||||| || || || |||||||| ||
Sbjct 149074 CTCGAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTC 149133
Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCG 82776
|||||||| || |||||||| || || || || | || | || || || | || ||||
Sbjct 149134 CTGAATCTTCGCCTTTACATTGTCGATGGTGTC-TGAGCTCTCAACCTCGAGGGTGATCG 149192
Query 82777 TCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||| || | ||||| ||||| ||||||||
Sbjct 149193 TCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 149226
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657
|||||| | |||||| || || || ||||| || || || || | || | | |||||
Sbjct 149470 CAGAACAAGGTGCAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGGCCGTC 149529
Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717
||| | || || ||||||||||| || ||||| || || || || || |||||||| ||
Sbjct 149530 TTCCAACTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCCGGGGGGATGCCTTCCTTGTC 149589
Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777
|| ||||| || || || || || || |||||| | || || || | || || ||
Sbjct 149590 CTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAACTCTCGACCTCGAGGGTAATGGT 149649
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || |||| |||||| || || ||||||||
Sbjct 149650 CTTTCCGGTCAGCGTCTTCACGAAGATCTGCAT 149682
Score = 105 bits (116), Expect = 1e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|||||||| || || ||||| || || || || | ||| | | ||||| || | |||
Sbjct 149708 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCCAACTGT 149767
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || || ||||| || ||||| || || || || || || ||||| || || |||||
Sbjct 149768 TTGCCCGCGAAGATGAGCCTTTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTG 149827
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| || || || || || || || | || || || | || ||||||||||||||
Sbjct 149828 GCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGATCGTCTTGCCTGTG 149887
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| ||||| ||||||||
Sbjct 149888 AGGGTCTTAACAAAGATCTGCAT 149910
>seq5010
Length=51657
Score = 122 bits (134), Expect = 2e-22
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || |||||||| || || || || | || | | |||
Sbjct 38506 CGGAGCACCAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCG 38447
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || ||||| || || || || || || || || || |||||||||
Sbjct 38446 TCCTCGAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCCGGGGGGATACCTTCCTTA 38387
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| |||||||| || || || || ||||| || || || | || || ||||| || ||
Sbjct 38386 TCCTGAATCTTGGCCTTCACGTTATCAATGGTGTCGG-AGCTCTCGACCTCCAAGGTAAT 38328
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||||||||| ||||| || || ||||||||
Sbjct 38327 CGTCTTGCCTGTCAGAGTCTTCACGAAGATCTGCAT 38292
Score = 104 bits (114), Expect = 5e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || ||||||||||| || |||||||| | || | | ||
Sbjct 38734 CGGAGCACCAGGTGGAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTACGGCCA 38675
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||| ||||| || || || ||||| || || || || |||||
Sbjct 38674 TCCTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTG 38615
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| || || || || || || || ||||| ||||| || | || ||||| | || ||
Sbjct 38614 TCCTGGATTTTAGCCTTAACGTTGTCAATGGTATC-CGAGCTCTCGACTTCAAGGGTGAT 38556
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| ||||| || | ||||| || || ||||||||
Sbjct 38555 GGTTTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 38520
>seq263
Length=97214
Score = 107 bits (118), Expect = 4e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || || || || || || || | || ||| |||
Sbjct 78091 CGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTTCGGCCG 78150
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || || ||||| || || || || || || || || || ||||||
Sbjct 78151 TCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTA 78210
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| || ||||| || || || || ||||| || || || | || ||||||||||| ||
Sbjct 78211 TCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCCG-AGCTCTCGACTTCCAAAGTGAT 78269
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| || || ||||||||
Sbjct 78270 GGTCTTGCCGGTCAGAGTCTTAACGAAGATCTGCAT 78305
Score = 105 bits (116), Expect = 1e-17
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| || || || || | || | | |||
Sbjct 78546 ACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACC 78605
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || || || || ||||| || || || || || || || |||||||||||
Sbjct 78606 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTT 78665
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773
|| || ||||| || || || || || || || || || | || || ||||| || |
Sbjct 78666 GTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTC-GGAGCTCTCGACCTCCAAGGTGA 78724
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| |||| ||||| || || ||||||||
Sbjct 78725 TGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 78761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981320415776954
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