Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq564 109 4e-19 seq410 104 2e-17 seq2385 102 5e-17 seq5010 100 2e-16 seq2700 91.5 1e-13 seq220 91.5 1e-13 seq490 86.0 4e-12 seq2468 84.2 1e-11 >seq564 Length=78751 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | || |||||| |||| || | ||| Sbjct 11251 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCGAGTTGC 11310 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||||||||| || |||| | ||||| ||||| ||| ||| Sbjct 11311 TTTCCGGCGAATATGAGACGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGAATCTTC 11370 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| | | ||| | |||||| || ||||| || | |||||||| || || || Sbjct 11371 GCCTTCA-CGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGT 11429 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | |||||| || ||||||||||| Sbjct 11430 CAGCGTTTTCACGAAGATCTGCAT 11453 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | || |||||| |||| || | ||| Sbjct 22090 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCGAGTTGC 22149 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || || || | ||||||||| || |||| | ||||| ||||| ||| ||| Sbjct 22150 TTTCCCGCGAATATGAGACGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGAATCTTC 22209 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| | | ||| | |||||| || ||||| || | |||||||| || || || Sbjct 22210 GCCTTCA-CGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGT 22268 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757 | || || || ||||||||||| ||| || Sbjct 22269 CAGGGTCTTCACGAAGATCTGCATCTTTGTTG 22300 >seq410 Length=85275 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || ||||||||||||| |||||||||| |||| || | || Sbjct 46571 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGCGAGTGTGCGTCCGTCCTCGAGCTGC 46512 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | ||||| || || |||| | || || ||||| || ||| Sbjct 46511 TTGCCGGCGAAGATGAGCCGCTGTTGGTCCGGCGGTATTCCCTCCTTGTCCTGGATCTTC 46452 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| || | ||| | |||||| ||| ||||| |||| |||||||| || || || Sbjct 46451 GCCTTC-ACGTTGTCGATGGTGTCCGATGACTCCACCTCAAGGGTGATCGTCTTCCCGGT 46393 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 46392 GAGAGTCTTCACGAAGATCTGCAT 46369 >seq2385 Length=44452 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || ||||||||||| | ||| || || | || ||||| ||||| || ||||| Sbjct 34612 TCCTTCTGGATGTTGTAATCAGCGAGGGTTCGCCCATCTTCCAACTGTTTCCCTGCAAAG 34553 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | | |||||||||| | || | || || || || ||| || || | |||| Sbjct 34552 ATAAGCCTCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGAATCTT-TGCCTTGACATT 34494 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | |||||| ||| || || |||| ||||||||||| || || | ||| || || Sbjct 34493 GTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATCGTTTTGCCAGTCAGCGTCTTCAC 34434 Query 33738 AAAGATCTGCATA 33750 ||||||||||||| Sbjct 34433 AAAGATCTGCATA 34421 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 33545 AATGTAGAGTGCT--CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAA 33602 || || ||||| | ||| || || |||||||| || | || ||||| | || || | Sbjct 34021 AAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAG 33962 Query 33603 TTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAAT 33662 |||||| || ||||| |||| ||||||||| || | || | || || ||||| ||| Sbjct 33961 TTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAAT 33902 Query 33663 TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTAC 33721 ||| || ||||| ||| | || ||| ||| || || |||| ||||| || || | Sbjct 33901 TTTGGCCTT-AACATTGTCGATTGTATCGGATGACTCGACCTCAAGAGTGATGGTCTTCC 33843 Query 33722 CTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| ||||| Sbjct 33842 CGGTCAATGTCTTTACAAAGATTTGCAT 33815 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| ||||||||||| | | |||||| | || || | || || || |||||| Sbjct 34840 TCCTTTTGGATGTTGTAATCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTCCCTGCAAAA 34781 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | | ||||| || | || | || || ||||| || || || ||||| Sbjct 34780 ATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTT-AACATT 34722 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | |||||| ||| || || |||| ||||||||||| || || | ||| || || Sbjct 34721 GTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATCGTTTTGCCAGTCAGCGTCTTCAC 34662 Query 33738 AAAGATCTGCATA 33750 ||||||||||||| Sbjct 34661 AAAGATCTGCATA 34649 >seq5010 Length=51657 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||| || || ||| ||| || || ||||| || |||| Sbjct 38063 ACCACCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGC 38004 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | |||||| |||||||| ||||| | ||||||||| | || Sbjct 38003 GAGGGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAGATCAACCTCTGCTGATCCGGGGG 37944 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || ||| ||| | ||| | ||||||| ||||||| Sbjct 37943 GATGCCCTCCTTGTCCTGGATCTTGGCTTT-AACGTTGTCGATGGTGTCGGAAGATTCCA 37885 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || || ||||||||||| Sbjct 37884 CCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 37836 >seq2700 Length=42081 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || ||||| || |||| ||| ||||| | || || | || Sbjct 28814 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGC 28755 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | |||||||| || |||| | |||||| ||||| || || Sbjct 28754 TTTCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATACCTTCCTTGTCCTGGATCTTG 28695 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| | | ||| | |||||| || || || |||| |||||||| || || || Sbjct 28694 GCCTTCA-CGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATCGTCTTCCCCGT 28636 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||| || |||||||||||||| Sbjct 28635 CAGCGTCTTCACAAAGATCTGCAT 28612 >seq220 Length=196394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || | ||| | ||| |||||| ||| || || |||||||| |||| Sbjct 149683 ACCACCGCGGAGGCGGAGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 149742 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| ||||| ||||| || || || || | | ||||| || |||| Sbjct 149743 GAGAGTGCGGCCGTCCTCCAACTGTTTGCCCGCGAAGATGAGCCTTTGCTGGTCCGGCGG 149802 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | | | ||| | |||||| || |||| Sbjct 149803 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGGACTCCA 149861 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||||| || ||||| | || || |||||||||||||| Sbjct 149862 CCTCGAGGGTGATCGTCTTGCCTGTGAGGGTCTTAACAAAGATCTGCAT 149910 >seq490 Length=81643 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| ||||| |||||||| || | || ||||| | || |||||||| Sbjct 58804 TGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGACCATCCTCCAATTGC 58745 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || ||||| |||| ||||||||| || | || | || || ||||| || || Sbjct 58744 TTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTG 58685 Query 33667 TGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | ||| |||| || || || || || |||| ||||| || || ||||| Sbjct 58684 GCCTTGA-CATTGTCAATAGTATCTGAAGACTCAACCTCAAGAGTGATTGTCTTGCCTGT 58626 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || || || |||||||||||||| Sbjct 58625 CAAGGTCTTCACAAAGATCTGCAT 58602 >seq2468 Length=52418 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||| || || |||||||| |||| || ||||| |||| || | || Sbjct 10120 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGCCCGTCTTCAAGCTG 10061 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| || || | |||||||| || |||| | || || ||||| || || Sbjct 10060 CTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTT 10001 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | || | | | ||| | ||||||| || ||||| || | |||||||| || || | Sbjct 10000 CGCCTTGA-CGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTGCCCG 9942 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | || || |||||||||||||| Sbjct 9941 TGAGGGTCTTCACAAAGATCTGCAT 9917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328542611061120