Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq220 116 9e-21 seq2385 111 4e-19 seq410 111 4e-19 seq263 105 2e-17 seq564 98.7 2e-15 seq2700 96.9 8e-15 seq5010 93.3 1e-13 seq2468 93.3 1e-13 >seq220 Length=196394 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || || || |||| ||||| || |||||||| | || Sbjct 148983 AAGACCCTCACTGGTAAGACCATTACCCTGGAGGTGGAGAGCTCTGACACTATTGATAAT 148924 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || || || || ||||||| || ||||| |||||| Sbjct 148923 GTGAAGGCGAAGATCCAAGACAAGGAGGGGATCCCGCCGGACCAGCAGAGACTCATCTTC 148864 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||| ||||| | |||||||| || || ||| | ||||||||||| Sbjct 148863 GCTGGGAAGCAGCTGGAGGATGGGCGCACTTTGGCAGACTATAACATTCAGAAAGAGTCC 148804 Query 206365 ACTCTTCACCTTGT 206378 ||||| || || || Sbjct 148803 ACTCTCCATCTGGT 148790 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || ||||| || || || | || || || |||||||| || |||| Sbjct 149667 AAGACGCTGACCGGAAAGACCATTACCCTCGAGGTCGAGAGTTCTGATACCATCGACAAC 149608 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || |||||| ||||| || ||||| Sbjct 149607 GTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAAAGGCTCATCTTT 149548 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||||||||||| || | || | || || |||||| ||||||| ||||| Sbjct 149547 GCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCGCAGACTACAACATCCAGAAGGAGTCC 149488 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||||||| |||| || || Sbjct 149487 ACACTGCACCTTGTTCTGAGGCTCCG 149462 >seq2385 Length=44452 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || ||||||||||| | || || || || ||| Sbjct 34653 CAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCGGAC 34712 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || || |||||| ||| Sbjct 34713 ACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAGCAA 34772 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || || || |||||| | || |||||| | |||||||| ||||||||| || Sbjct 34773 AGGCTCATTTTTGCAGGGAAGCAGCTTGAGGATGGACGCACTTTGGCTGATTACAACATC 34832 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || || ||||| || |||||||| Sbjct 34833 CAAAAGGAATCTACGCTCCACCTTGT 34858 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || ||||||||||| | || || || || ||| Sbjct 34425 CAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCGGAC 34484 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || || || ||| || || || Sbjct 34485 ACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAGCAG 34544 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || |||||||| || || || |||||||||||||| | || | || ||||||||| || Sbjct 34545 AGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAACATC 34604 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || ||||| ||||| || || Sbjct 34605 CAGAAGGAATCTACGCTTCATCTCGT 34630 >seq410 Length=85275 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || |||||||| | || ||||| || ||||| |||| Sbjct 46384 AAGACTCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCATCGGACACCATCGACAAC 46443 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || ||||| ||||||| || | || |||||| Sbjct 46444 GTGAAGGCGAAGATCCAGGACAAGGAGGGAATACCGCCGGACCAACAGCGGCTCATCTTC 46503 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || ||| | || | |||||||||||| ||||||| ||||| Sbjct 46504 GCCGGCAAGCAGCTCGAGGACGGACGCACACTCGCCGATTACAACATCCAGAAGGAGTCC 46563 Query 206365 ACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 46564 ACTCTTCACCTCGT 46577 >seq263 Length=97214 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| ||||| || || || || ||| Sbjct 78758 CAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCTTGGAGGTCGAGAGCTCCGAC 78699 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || |||||||| |||||| || Sbjct 78698 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCGGACCAGCAG 78639 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| |||||| | || || || | || | ||||| |||||| || Sbjct 78638 AGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTACAACATC 78579 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 78578 CAGAAGGAGTCCACCCTCCACCTGGT 78553 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||||||||||| || || || ||||| | || Sbjct 78290 AAGACTCTGACCGGCAAGACCATCACTTTGGAAGTCGAGAGCTCGGACACCATTGACAAC 78231 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || || ||||||||| Sbjct 78230 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGAGGCTTATCTTC 78171 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | || | || || |||||| |||| || ||||| Sbjct 78170 GCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCGCAGACTACAACATCCAAAAGGAGTCC 78111 Query 206365 ACTCTTCACCTTGT 206378 || |||||||| || Sbjct 78110 ACCCTTCACCTGGT 78097 >seq564 Length=78751 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 |||||||| || || || |||||||| | || ||||| || ||||| |||| Sbjct 11438 AAAACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCGTCGGACACCATCGACAAC 11379 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||| || ||||||| || | || || ||| Sbjct 11378 GTGAAGGCGAAGATTCAGGACAAGGAAGGGATCCCGCCGGACCAGCAGCGTCTCATATTC 11319 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | || || ||| | || | || || |||||| ||||||| ||||| Sbjct 11318 GCCGGAAAGCAACTCGAGGACGGACGCACCCTTGCTGACTACAACATCCAGAAGGAGTCC 11259 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 11258 ACCCTCCACCTCGT 11245 >seq2700 Length=42081 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || || |||||||| | || || || || ||| Sbjct 28615 CAGATCTTTGTGAAGACGCTGACGGGGAAGACGATCACCCTTGAGGTTGAGTCGTCGGAC 28674 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||| || ||||||| || Sbjct 28675 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAG 28734 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || ||||| | || | ||||| || ||| || Sbjct 28735 CGGCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTATAACATC 28794 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 28795 CAGAAGGAGTCCACCCTCCACCTCGT 28820 >seq5010 Length=51657 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || ||||| || ||||| || || || || ||||| | || Sbjct 38307 AAGACTCTGACAGGCAAGACGATTACCTTGGAGGTCGAGAGCTCCGACACCATTGATAAC 38366 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||| || |||||| || || ||||| || Sbjct 38367 GTGAAGGCCAAGATTCAGGATAAGGAAGGTATCCCCCCGGACCAGCAGAGGCTTATTTTT 38426 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | || | || || |||||| | ||||||||||| Sbjct 38427 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCGGACTACAACATTCAGAAAGAGTCC 38486 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 38487 ACCCTCCACCTGGT 38500 >seq2468 Length=52418 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || |||||||| | || ||||| || ||| Sbjct 9920 CAGATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGAC 9979 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || ||||||| || Sbjct 9980 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 10039 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | ||||| || | || | ||||| |||||| || Sbjct 10040 CGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGACTACAACATC 10099 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || || || || Sbjct 10100 CAGAAGGAGTCCACCCTCCATCTCGT 10125 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || |||||||| | || ||||| || ||||| |||| Sbjct 733 AAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAAC 792 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || ||||||| || | || |||||| Sbjct 793 GTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGGCTCATCTTC 852 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||| || | || | ||||| |||||| ||||||| ||||| Sbjct 853 GCCGGCAAGCAGCTTGAAGACGGGCGTACCCTTGCCGACTACAACATCCAGAAGGAGTCC 912 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 913 ACCCTCCATCTCGT 926 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || |||||||| | || ||||| || ||||| |||| Sbjct 10277 AAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAAC 10336 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || ||||||| || | || |||||| Sbjct 10337 GTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGGCTCATCTTC 10396 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||| || | || | ||||| |||||| ||||||| ||||| Sbjct 10397 GCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGACTACAACATCCAGAAGGAGTCC 10456 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 10457 ACCCTCCATCTCGT 10470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181210786205406