Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq220 116 9e-21
seq2385 111 4e-19
seq410 111 4e-19
seq263 105 2e-17
seq564 98.7 2e-15
seq2700 96.9 8e-15
seq5010 93.3 1e-13
seq2468 93.3 1e-13
>seq220
Length=196394
Score = 116 bits (128), Expect = 9e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || || || |||| ||||| || |||||||| | ||
Sbjct 148983 AAGACCCTCACTGGTAAGACCATTACCCTGGAGGTGGAGAGCTCTGACACTATTGATAAT 148924
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || || || || ||||||| || ||||| ||||||
Sbjct 148923 GTGAAGGCGAAGATCCAAGACAAGGAGGGGATCCCGCCGGACCAGCAGAGACTCATCTTC 148864
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||| ||||| | |||||||| || || ||| | |||||||||||
Sbjct 148863 GCTGGGAAGCAGCTGGAGGATGGGCGCACTTTGGCAGACTATAACATTCAGAAAGAGTCC 148804
Query 206365 ACTCTTCACCTTGT 206378
||||| || || ||
Sbjct 148803 ACTCTCCATCTGGT 148790
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||||| || ||||| || || || | || || || |||||||| || ||||
Sbjct 149667 AAGACGCTGACCGGAAAGACCATTACCCTCGAGGTCGAGAGTTCTGATACCATCGACAAC 149608
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| || |||||| ||||| || |||||
Sbjct 149607 GTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAAAGGCTCATCTTT 149548
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||||||||||| || | || | || || |||||| ||||||| |||||
Sbjct 149547 GCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCGCAGACTACAACATCCAGAAGGAGTCC 149488
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || ||||||||| |||| || ||
Sbjct 149487 ACACTGCACCTTGTTCTGAGGCTCCG 149462
>seq2385
Length=44452
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || ||||| || || ||||||||||| | || || || || |||
Sbjct 34653 CAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCGGAC 34712
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || || || || |||||| |||
Sbjct 34713 ACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAGCAA 34772
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || || || || || |||||| | || |||||| | |||||||| ||||||||| ||
Sbjct 34773 AGGCTCATTTTTGCAGGGAAGCAGCTTGAGGATGGACGCACTTTGGCTGATTACAACATC 34832
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|| || || ||||| || ||||||||
Sbjct 34833 CAAAAGGAATCTACGCTCCACCTTGT 34858
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || ||||| || || ||||||||||| | || || || || |||
Sbjct 34425 CAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCGGAC 34484
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||||||| || || || || ||| || || ||
Sbjct 34485 ACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAGCAG 34544
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| |||||||| || || || |||||||||||||| | || | || ||||||||| ||
Sbjct 34545 AGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAACATC 34604
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || ||||| ||||| || ||
Sbjct 34605 CAGAAGGAATCTACGCTTCATCTCGT 34630
>seq410
Length=85275
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || |||||||| | || ||||| || ||||| ||||
Sbjct 46384 AAGACTCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCATCGGACACCATCGACAAC 46443
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || ||||| ||||||| || | || ||||||
Sbjct 46444 GTGAAGGCGAAGATCCAGGACAAGGAGGGAATACCGCCGGACCAACAGCGGCTCATCTTC 46503
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || ||| | || | |||||||||||| ||||||| |||||
Sbjct 46504 GCCGGCAAGCAGCTCGAGGACGGACGCACACTCGCCGATTACAACATCCAGAAGGAGTCC 46563
Query 206365 ACTCTTCACCTTGT 206378
||||||||||| ||
Sbjct 46564 ACTCTTCACCTCGT 46577
>seq263
Length=97214
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| ||||| || || || || |||
Sbjct 78758 CAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCTTGGAGGTCGAGAGCTCCGAC 78699
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || |||||||| |||||| ||
Sbjct 78698 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCGGACCAGCAG 78639
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 78638 AGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTACAACATC 78579
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 78578 CAGAAGGAGTCCACCCTCCACCTGGT 78553
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || |||||||||||||| || || || ||||| | ||
Sbjct 78290 AAGACTCTGACCGGCAAGACCATCACTTTGGAAGTCGAGAGCTCGGACACCATTGACAAC 78231
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || || |||||||||
Sbjct 78230 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGAGGCTTATCTTC 78171
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || | || || |||||| |||| || |||||
Sbjct 78170 GCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCGCAGACTACAACATCCAAAAGGAGTCC 78111
Query 206365 ACTCTTCACCTTGT 206378
|| |||||||| ||
Sbjct 78110 ACCCTTCACCTGGT 78097
>seq564
Length=78751
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|||||||| || || || |||||||| | || ||||| || ||||| ||||
Sbjct 11438 AAAACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCGTCGGACACCATCGACAAC 11379
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || ||||| || ||||||| || | || || |||
Sbjct 11378 GTGAAGGCGAAGATTCAGGACAAGGAAGGGATCCCGCCGGACCAGCAGCGTCTCATATTC 11319
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||| | || || ||| | || | || || |||||| ||||||| |||||
Sbjct 11318 GCCGGAAAGCAACTCGAGGACGGACGCACCCTTGCTGACTACAACATCCAGAAGGAGTCC 11259
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 11258 ACCCTCCACCTCGT 11245
>seq2700
Length=42081
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || ||||| || || || |||||||| | || || || || |||
Sbjct 28615 CAGATCTTTGTGAAGACGCTGACGGGGAAGACGATCACCCTTGAGGTTGAGTCGTCGGAC 28674
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||| || ||||||| ||
Sbjct 28675 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAG 28734
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||||||||||||| | || ||||| | || | ||||| || ||| ||
Sbjct 28735 CGGCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTATAACATC 28794
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 28795 CAGAAGGAGTCCACCCTCCACCTCGT 28820
>seq5010
Length=51657
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || ||||| || ||||| || ||||| || || || || ||||| | ||
Sbjct 38307 AAGACTCTGACAGGCAAGACGATTACCTTGGAGGTCGAGAGCTCCGACACCATTGATAAC 38366
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || ||||| || |||||| || || ||||| ||
Sbjct 38367 GTGAAGGCCAAGATTCAGGATAAGGAAGGTATCCCCCCGGACCAGCAGAGGCTTATTTTT 38426
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || | || || |||||| | |||||||||||
Sbjct 38427 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCGGACTACAACATTCAGAAAGAGTCC 38486
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 38487 ACCCTCCACCTGGT 38500
>seq2468
Length=52418
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| || || |||||||| | || ||||| || |||
Sbjct 9920 CAGATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGAC 9979
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || ||||||| ||
Sbjct 9980 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 10039
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | ||||| || | || | ||||| |||||| ||
Sbjct 10040 CGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGACTACAACATC 10099
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || || || ||
Sbjct 10100 CAGAAGGAGTCCACCCTCCATCTCGT 10125
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || |||||||| | || ||||| || ||||| ||||
Sbjct 733 AAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAAC 792
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || ||||||| || | || ||||||
Sbjct 793 GTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGGCTCATCTTC 852
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | ||||| || | || | ||||| |||||| ||||||| |||||
Sbjct 853 GCCGGCAAGCAGCTTGAAGACGGGCGTACCCTTGCCGACTACAACATCCAGAAGGAGTCC 912
Query 206365 ACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 913 ACCCTCCATCTCGT 926
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || |||||||| | || ||||| || ||||| ||||
Sbjct 10277 AAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAAC 10336
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || ||||||| || | || ||||||
Sbjct 10337 GTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGGCTCATCTTC 10396
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | ||||| || | || | ||||| |||||| ||||||| |||||
Sbjct 10397 GCCGGCAAGCAGCTTGAAGACGGGCGCACCCTTGCCGACTACAACATCCAGAAGGAGTCC 10456
Query 206365 ACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 10457 ACCCTCCATCTCGT 10470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181210786205406
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |