Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq2845 560 3e-155 seq6845 284 4e-72 seq7657 244 3e-60 seq2279 210 6e-50 seq5570 197 4e-46 seq18140 165 2e-36 seq2585 163 8e-36 seq42 105 2e-18 seq583 95.1 4e-15 seq149 93.3 1e-14 seq5118 87.8 5e-13 seq10619 86.0 2e-12 >seq2845 Length=54259 Score = 560 bits (620), Expect = 3e-155 Identities = 705/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 |||||||||||| | || ||||| || ||||||| || | || ||| || | Sbjct 39529 AACCGTCTTTATATCGGATGGTTCGGTGTTTTGATGATCCC-TACCTTATTGACTGCAAC 39587 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 39588 TTCTGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 39647 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| |||| ||| || |||||||| || || || || || ||| | | || | Sbjct 39648 ACCTGTTTCTGGTTCTCTACTTTATGGAAATAATATTATTTCTGGTGCCATTATTCCTAC 39707 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | ||| || || ||| | ||||| || ||||| |||||||| || ||||||| Sbjct 39708 TTCTGCA--GCTATTGGATTGCACTTTTATCCAATCTGGGAAGCAGCATCCGTTGATGAG 39765 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | || | | || | |||||| | |||| || | Sbjct 39766 TGGTTATACAATGGCGGTCCTTATGAATTAATTGTTCTACACTTCTTACTTGGTGTAGCT 39825 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||| ||||| || |||||||||||||| | || || || ||| | || |||||| | Sbjct 39826 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCT 39885 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | ||||||| | ||| Sbjct 39886 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCTATTGGT 39945 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||||| || ||||| || || ||||||| |||| | Sbjct 39946 CAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATT 40005 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || ||||| ||||| || ||||| || ||||| ||| | || || ||||| Sbjct 40006 GTATTCCAGGCAGAACACAACATCCTTATGCATCCATTCCATATGTTAGGTGTAGCTGGT 40065 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| ||||| ||||| ||||| ||||| ||||| | || || || | | ||| Sbjct 40066 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGAT 40124 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || |||||| || ||| ||| | ||||||| ||||| ||||| ||||| Sbjct 40125 CAGGGAAACCACTGAAAACGAATCTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGA 40184 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| |||||||| ||||| ||||| ||||| || |||||||||||||||||| Sbjct 40185 AACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 40244 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| || |||||| |||| |||||| | ||||| ||||| || ||||| || || Sbjct 40245 TTTCAACAACTCTCGTTCTTTACATTTCTTCTTGGCTGCTTGGCCTGTAGTAGGTATCTG 40304 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 |||| |||| || || || ||| ||||| || || || || ||||| ||||| ||||| Sbjct 40305 GTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAACTTCAACCA 40364 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | |||| | |||||||| ||||| |||||||||||| | |||| || || Sbjct 40365 ATCTGTAGTTGACAGTCAAGGTCGTGTTATTAACACTTGGGCTGATATCATCAACCGTGC 40424 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | |||||||||||||| ||||||||||| |||||||| || || || || Sbjct 40425 TAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 40484 Query 29616 T 29616 | Sbjct 40485 T 40485 >seq6845 Length=24227 Score = 284 bits (314), Expect = 4e-72 Identities = 277/357 (78%), Gaps = 0/357 (0%) Strand=Plus/Minus Query 29260 GAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACT 29319 || || |||||| || ||| ||| | ||||||| ||||| ||||| ||||| ||| Sbjct 24212 GAAACCACTGAAAACGAATCTGCTAACGAAGGTTACATATTTGGTCAAGAGGAAGAAACT 24153 Query 29320 TATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTC 29379 |||||||||||||| ||||| ||||| ||||| || |||||||||||||||||| |||| Sbjct 24152 TATAACATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 24093 Query 29380 AATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTC 29439 || || |||||| |||| |||||| | ||||| ||||| || ||| | || |||||| Sbjct 24092 AACAACTCTCGTTCTTTACATTTCTTCTTGGCTGCTTGGCCTGTAGTAAGTATCTGGTTC 24033 Query 29440 GCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCG 29499 |||| || || || ||| ||||| || || || || ||||||||||| ||||| || Sbjct 24032 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTTAACTTCAACCAATCT 23973 Query 29500 CTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAAC 29559 | | ||||| | |||| ||| ||||| ||||||| |||| | |||| || |||||| Sbjct 23972 GTAGTTGACAATCAAGGTCATGTTATTAACACTTGGGATGATATCATCAACCGTGCTAAC 23913 Query 29560 CTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 || || | |||||||||||||| ||||||||||| |||||||| || || || ||| Sbjct 23912 CTGGGTATGGAAGTAATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 23856 >seq7657 Length=22303 Score = 244 bits (270), Expect = 3e-60 Identities = 245/318 (77%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 29299 TTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTG 29358 ||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct 8430 TTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTG 8489 Query 29359 ATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGG 29418 || || ||||||||| |||||| || |||||| ||| |||||| | ||||| ||| Sbjct 8490 ATTTTTCAATATGCTAGTTTCAACAACTTTCGTTCTTTACGTTTCTTCTTGGCTGCTTGG 8549 Query 29419 CCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAAC 29478 || || ||||| ||||||||| |||| || || || ||| ||||| || || || || Sbjct 8550 CCTGTAGTAGGTATTTGGTTCACTGCGTTAGGTATTAGTACTATGGCTTTCAACCTAAAT 8609 Query 29479 GGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCT 29538 ||||| |||| || || | | | |||| | |||||||| ||||| ||||||||| Sbjct 8610 GGTTTCAACTCCAATCAATATGTAGTTGACAGTCAAGGTCGTGTTATTAACACTTGGGCT 8669 Query 29539 GATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAAC 29598 ||| | |||| || |||||||| || | |||||||| ||||| ||||||||||| ||| Sbjct 8670 GATATAATCAACCGTGCTAACCTTGGTATGGAAGTAATACATGAACGTAATGCTCACAAC 8729 Query 29599 TTCCCACTTGATCTGGCT 29616 ||||| || || || ||| Sbjct 8730 TTCCCTCTAGACCTAGCT 8747 >seq2279 Length=45260 Score = 210 bits (232), Expect = 6e-50 Identities = 436/642 (68%), Gaps = 34/642 (5%) Strand=Plus/Plus Query 28978 GAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTC 29037 |||||||| | ||| || || ||| | || |||||| | | ||||| ||||||| Sbjct 42032 GAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTATTGCATATTCAGCTCTT--- 42088 Query 29038 GCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCG 29097 || | || |||||| | |||||| | |||||||| ||| || | Sbjct 42089 --AGTG--AT-----GTTTTCTTGATCTACCTTATTGGTCAAGGAAGTTTCTATGATGGT 42139 Query 29098 ATGCCTTTGGGTATTTCAGGCACCTT-CAACTACATGCTGGTGTTCCAAGCCGAACATAA 29156 |||||||| | ||||| || ||||| ||||| ||| | || || || ||| || Sbjct 42140 ATGCCTTTAGAAATTTCTGGTACCTTTCAACTTCAT-----TATTTCAGGCATAACGGAA 42194 Query 29157 CATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATT 29216 ||| || |||| || ||||||||| | || || |||| || ||| || ||||| Sbjct 42195 CATCCTTATGCGTCCATTCCACATGTTAGGTGTAGCTGATGTATTCAACATCTTCCTATT 42254 Query 29217 TAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGACGACTGAAGACA 29275 | ||| ||| ||| | || | ||| || || || |||||| | Sbjct 42255 CATTGCTATG----------TTGATAATATCTAGTTTGATGATGGAAACCACTGAAAAAG 42304 Query 29276 TCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCG 29335 | | || | ||||||| ||||| ||||| || || |||||||| |||||||| | Sbjct 42305 AATATGCTAATGAAGGTTACAGATTTGGTCAAGAGGACGAAACTTATAATATCGTAGCTG 42364 Query 29336 CTCACGGTTACTTTGGAC-GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCT 29394 ||| |||| |||| ||| | ||||||||||| |||||| |||||| ||| ||||| Sbjct 42365 CTCGTGGTT-CTTTTGACTGATTGATCTTCCACTATGCTAGTTTCAACAAT--TTGTTCT 42421 Query 29395 CTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTT 29454 |||| ||| || | | ||| | ||| | ||||| || | |||| ||| || || || Sbjct 42422 TTACATTTCCTCTTGGTTGCTTAGCCCATAGTAGGTATCTAGTTCACTGATTTAGGAATT 42481 Query 29455 TCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAAT 29514 ||| ||||| || || || || ||||| ||||| ||| | | | |||||| | Sbjct 42482 AGTACCATGGCTTTCAACCTAAATGGTTTCAACTTCAACTAATTTGTAGATGACAACCAA 42541 Query 29515 GGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTA 29574 | |||||| | ||| |||||||| ||| | |||||| |||||||| || | |||||| Sbjct 42542 GATCGTGTTAGTAA-ACTTGGGCCGATATCAACAATCGTGCTAACCTTGGTATGGAAGTA 42600 Query 29575 ATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||||||| |||||||||| |||||||| || || || ||| Sbjct 42601 ATGCATGAATGTAATGCTCACAACTTCCCTCTAGACCTAGCT 42642 >seq5570 Length=28071 Score = 197 bits (218), Expect = 4e-46 Identities = 253/347 (73%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 29217 TAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACA 29275 |||||| ||||| ||||| | || || || | | ||| | | || || |||||| || Sbjct 597 TAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACG 655 Query 29276 TCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCG 29335 ||| ||| | ||||||| ||||| ||||| ||||| |||||||| |||||||| | Sbjct 656 AATCTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTG 715 Query 29336 CTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTC 29395 |||| ||||| ||||| || |||||||||||||||||| |||||| || |||||| Sbjct 716 CTCATGGTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTT 775 Query 29396 TACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTT 29455 |||| ||||| | ||||| |||| || ||||| || |||| || || || Sbjct 776 TACATTTCTTGTTGGCTGCTTGGCTTGTAGTAGGTATCTGGT--------TTAGGTATTA 827 Query 29456 CTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATG 29515 ||| ||||| || || || || ||||| ||||| ||||| | | | |||| | | Sbjct 828 GTACTATGGCTTTCAACCTAAATGGTTTCAACTTCAACCAATTTGTAGTTGACAGTCAAG 887 Query 29516 GTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTC 29562 ||||||| ||||| |||||||||||| | || | || ||||||||| Sbjct 888 GTCGTGTTATTAACACTTGGGCTGATATCATCTACCGTGCTAACCTC 934 >seq18140 Length=7788 Score = 165 bits (182), Expect = 2e-36 Identities = 495/753 (66%), Gaps = 22/753 (3%) Strand=Plus/Plus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || |||||| | |||||||| || || ||| | || |||||| | || | |||||| Sbjct 1921 TTTATTATTTCCTTCATTGCTGCTCCTCCAATAGATATTGATAGTATTCATGAACCTACT 1980 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGCAGCAAT 28845 ||| || || ||||||| || || || || || || | || | | Sbjct 1981 TCTGATTCCCTACTTCATGGAAATAATATTATTTCTGGTGCTAATATTCCTACTTCGACA 2040 Query 28846 GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTAC 28905 || | ||| | ||||| || ||||| ||||||| | || ||||||| ||| | ||| Sbjct 2041 GCTTTTGGATTGCACTTTTATCCAATATGGGAAGTAACATCCATTGATGAGTGGTTATAC 2100 Query 28906 AACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATG 28965 || || || || | | | | || | |||||| | |||| || | | | ||| Sbjct 2101 AATGGCGGTCCTTATGTATTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTAATATG 2160 Query 28966 GGACGCGAGTGGGAACTTAGCTA---TCGACTAGGAATGAGGCCGTGGATTTGTGTCGCA 29022 || | ||||||||||||| || | | || || ||| | || |||||| ||| ||| Sbjct 2161 GGTGGTGAGTGGGAACTTAATTATTTTTGTCTCGGTATGCGTCCTTGGATTGTTGTTGCA 2220 Query 29023 TACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGT 29082 || |||| ||| | | ||| || | ||||| | ||||||| | ||| |||| Sbjct 2221 TATTCAGTTCCTATTGTAGCTGCTATTATTGTTTT-TTTATCTACCCTATTGGTTAAGGA 2279 Query 29083 TCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTC 29142 ||| | | | || ||||| || ||||| | || ||||||| || | || ||| Sbjct 2280 ATTTT---CTATGATATCCCTTTAGGAATTTCTAGTACTTTCAACTTTGTGATTGTATTC 2336 Query 29143 CAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTC 29202 ||| ||||| ||||| || ||| | || ||||||||| | | || ||||| || ||| Sbjct 2337 CAACTAGAACACAACATCCTTATGAATCCATTCCACATGTTAGATGTAGCTGGTGTATTC 2396 Query 29203 GGTGGCTCGC-------TATTTAG-TGCAATGCACGGTTCGCTTG-TCACGTCCTCGCTT 29253 | |||| | ||||||| ||| || | |||| |||| | || | || | || Sbjct 2397 AATAGCTCCCTATTCCATATTTAGCTGCTAT-TATTGTTC-CTTGATAACCT-CTAGTTT 2453 Query 29254 G-TGCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGA 29312 | | | || | | |||| | | | ||| | | ||| | ||||| ||||| || Sbjct 2454 GATCAGAGAAATCATTGAAAATGAATTTGTTAACAAAGATTAAAGATTTGGTCAAGAGGA 2513 Query 29313 AGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGC 29372 ||| |||||||| ||||||| | ||| ||||| ||||| | |||||||||||||||| Sbjct 2514 AGAAACTTATAATATCGTAGATGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGA 2573 Query 29373 TTCTTTCAATAATAGCCGTTCTCTACA--CTTCTTCCTTGCTGCCTGGCCGGTGGTAGGG 29430 | |||||| || | |||| |||| || ||| | | ||| |||| || ||||| Sbjct 2574 TAGTTTCAACAACTCTCATTCTTTACATTTTTTTTCTTGGTTGCTTGGCTTGTAGTAGGT 2633 Query 29431 ATTTGGTTCGCTGCCTTGGGCGTTTCTACAATG 29463 || |||||| ||| || || || ||| ||| Sbjct 2634 ATCTGGTTCATTGCTTTAGGTATTAGTACTATG 2666 Score = 93.3 bits (102), Expect = 1e-14 Identities = 115/156 (74%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 29457 TACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGG 29516 ||| ||||| || || || || ||||| ||||| ||||| || | | || | | | Sbjct 3119 TACTATGGCTTTCAACCTAAATGGTTTCAACTTCAACCAATCT-TAGTTGATAGTCAAGT 3177 Query 29517 TCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAAT 29576 ||||| ||||| |||||||||||| | |||| | |||||||| | | |||||||| Sbjct 3178 TCGTGCTATTAACACTTGGGCTGATATCATCAACCATGCTAACCTTCGTATGGAAGTAAT 3237 Query 29577 GCATGAGCGTAATGCTCATAACTTCCCACTTGATCT 29612 |||||| | ||||||||| || ||||| || || || Sbjct 3238 GCATGAACATAATGCTCACAAATTCCCTCTAGACCT 3273 >seq2585 Length=42866 Score = 163 bits (180), Expect = 8e-36 Identities = 354/523 (68%), Gaps = 19/523 (4%) Strand=Plus/Minus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || ||||| || ||| | || || || | ||| | |||||||| || || |||| ||| Sbjct 16797 TTTATTATCGCCTTCGTCGCTGCTCCTCGAGTAGTTATTGATGGTATTCGTGAACATGTT 16738 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGT---CGTACCGAGCAGC 28842 |||| ||| || |||||||| || || || || | || | | ||| | || Sbjct 16737 TCTGGTTCTCTACTTTATGGAAATAATATTATTTCTAGTGCATTATTCATACTT--CTGC 16680 Query 28843 AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTC 28902 | | || ||| | ||||| || |||||||||||||| | || || || | | | | Sbjct 16679 AGTT--ATTGGATTGCACTTTTATCCAATTTGGGAAGCAACATCCATTTATCAGTAGTTA 16622 Query 28903 TACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTAC 28962 ||||| || || | | || | | || |||||| | |||| || | ||| Sbjct 16621 TACAATGGCGGTACTTATGAATTAATTGTTCGACACTTCTTACTTGGTGTAGCTTGTTAT 16562 Query 28963 ATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCA 29022 ||||| || ||||||||| |||| | ||| || | ||| | || |||||| ||| ||| Sbjct 16561 ATGGGTCGTGAGTGGGAATTTAGTTTTCGTCTGAGTATGTGTCCTTGGATTGTTGTTGCA 16502 Query 29023 TACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGG- 29081 || ||| ||| || ||| | || || |||||| | |||| || | | |||||| Sbjct 16501 TATTCAACTCTTGTTGCAACTGCTATTGTTGTTTTCTTGATCTATCCTATTGTTCAAGGA 16442 Query 29082 ---TTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGT 29138 |||| | | || ||| |||| || |||| || || | ||| | |||| | || Sbjct 16441 AGTTTCTCTGATCG----TATGTCTTTAGGAATTT-TGGTACTTCCAATTTCATGATTGT 16387 Query 29139 GTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCT--GGGCGTTGCTGGA 29196 ||||| || ||||| ||||| || ||||| || ||||||||| | ||| || || || Sbjct 16386 ATTCCAGGCAGAACACAACATCCTTATGCATCCATTCCACATGTTAGGGGTGTAGCAGGT 16327 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTG 29239 || ||||| ||||| ||||| ||||| ||||| | ||| |||| Sbjct 16326 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGATTC-CTTG 16285 >seq42 Length=175042 Score = 105 bits (116), Expect = 2e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 29317 ACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCT 29376 |||||||| |||||||| ||| ||||| ||||| || |||||||||||||||||| | Sbjct 98614 ACTTATAATATCGTAGCTCATCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 98673 Query 29377 TTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 29436 ||||| ||| | |||| |||| |||||| | ||| | ||||| | |||| || ||| Sbjct 98674 TTCAAAAATTCTCATTCTTTACATTTCTTCTTGGCTACTTGGCCTATAGTAGATATCTGG 98733 Query 29437 TTCGCTGCCTT 29447 ||| |||| || Sbjct 98734 TTCACTGCTTT 98744 >seq583 Length=109866 Score = 95.1 bits (104), Expect = 4e-15 Identities = 189/280 (68%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 28995 |||||| | |||| || | ||| ||||| || |||||||||||||| | ||| | Sbjct 82475 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTATG 82416 Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 | ||| | | |||||| ||| ||||| | |||||| || | | | || ||| Sbjct 82415 GCTATGCGTCTTTGGATTGTTGTTGCATATTTAGCTCCTGTTATAACTGTTATTGTTGTT 82356 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCA 29115 || | |||||| | | ||||| |||| || | ||| ||| | ||||| Sbjct 82355 TTTTTTATCTACCATATTGTTCAAGAAAGTTTTTCTGATGATATGTATTTAAGAATTTCT 82296 Query 29116 GGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 29175 | || ||||||| |||| | || |||||| | ||||| ||||| || || || |||| Sbjct 82295 GATACTTTCAACTTCATGATTGTATTCCAAACAGAACACAACATCCTTATTCATATGTTC 82236 Query 29176 CACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTAT 29215 || ||| | || || ||||| || |||| ||||| |||| Sbjct 82235 CATATGTTAGGTGTAGCTGGTGTATTCGACGGCTCCCTAT 82196 >seq149 Length=111170 Score = 93.3 bits (102), Expect = 1e-14 Identities = 142/202 (70%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 29292 TTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGG 29351 |||||| ||||| ||| | ||||| | |||||| | ||||| || | ||||| ||||| Sbjct 84534 TTACAAATTTGGTCAATAGGAAGATAGTTATAATGTTGTAGCTGCACGTGGTTATTTTGG 84593 Query 29352 ACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGC 29411 | || ||||||||||| ||| |||||| | |||| |||||| || ||| Sbjct 84594 CCAATTTATCTTCCAATACGCTAGTTTCAACATCTCTTGTTCATTACACTGGTTGGTTGT 84653 Query 29412 TGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAA 29471 | |||| || ||||| ||||||||| || | || || | | | ||| | ||||| Sbjct 84654 T---TGGCTTGTAGTAGGTATTTGGTTCACTCCTTTAGGTAATAGTGCTATGACTTTTAA 84710 Query 29472 TCTGAACGGTTTTAACTTTAAC 29493 || || ||||| ||||| ||| Sbjct 84711 CCTAAATGGTTTCAACTTCAAC 84732 >seq5118 Length=29677 Score = 87.8 bits (96), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 28969 CGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCA 29028 || |||||||||||||| | | || || ||| |||| |||||| ||| |||| || Sbjct 27479 CGTGAGTGGGAACTTAGTTCCCTTCTGGGTATGTGGCCTTGGATTGTTGTTGCATTTGCA 27538 Query 29029 GCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTT 29088 |||| | ||||| || |||| |||||| | |||||| | |||||||| ||| Sbjct 27539 ACTCCTATTGCAGCCGCTACTGCTGTTTTCTTGATCTACCATATTGGTCAAGGAAGTTT- 27597 Query 29089 AGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGC 29147 || | |||||||| || ||||| || || ||||||| |||| | | ||||| || Sbjct 27598 ---GATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATTATATTCCAGGC 27653 >seq10619 Length=16537 Score = 86.0 bits (94), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 28729 ATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTCGCT 28788 ||||| || |||| || || || ||||| ||||||||||| || || |||||| | || Sbjct 13208 ATTATAGCCTTCACCGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTATTTCT 13267 Query 28789 GGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGA--GCAGCAATG 28846 || ||| || |||||||| || || || || || ||| || | || | | ||| Sbjct 13268 GGTTCTCTACTTTATGGAAAAAATATTATTTCTGGTGCCATCATTCCTACTTCTGCA--T 13325 Query 28847 CCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGG 28899 | || ||| | ||||| || ||||| |||||||| | || ||||||| ||| Sbjct 13326 CTATTGGATTGCACTTTTATCCAATCTGGGAAGCAACACCAGTTGATGAGTGG 13378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146595435726956