Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq490 107 2e-18 >seq490 Length=81643 Score = 107 bits (118), Expect = 2e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGG 131960 ||| | ||| | ||||| ||| | | ||||||| |||||||| |||||||| ||| | || Sbjct 59735 ACGGAGGCGAAGAACCAGATGCAGGGTTGACTCCTTTTGAATATTGTAGTCTGCT-AGGG 59677 Query 131961 TACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 | ||| ||| || ||||| || || | | |||| || | |||||| |||||||| |||| Sbjct 59676 TGCGCCCATCCTCAAGCTGCTTCCCCGCAAAGATGAGCCTCTGTTGGTCTGGAGGAATGC 59617 Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080 | ||||| || ||||||| || | | || | || || | | || || || | Sbjct 59616 CCTCTTTGTCCTGAATTTTTGCCTTGACATTGTCAATGGTGTCTGAAGATTCAACCTCAA 59557 Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || ||||||||||| || | ||| |||||||| Sbjct 59556 GGGTTATGGTCTTGCCAGTCAGAGTCTTGACGAATATCTGCAT 59514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476371190514960