Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2468 105 6e-18
seq2385 105 6e-18
seq2700 104 2e-17
seq490 95.1 1e-14
seq263 93.3 4e-14
seq564 89.7 4e-13
seq220 86.0 5e-12
>seq2468
Length=52418
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| ||||| | || | || | ||| | || || || || || || |||||||||
Sbjct 10144 GCCACCGCGGAGGCGAAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 10085
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| | ||||| ||||||| ||||| || |||||| | ||||| ||||| || ||||||||
Sbjct 10084 AAGGGTGCGCCCGTCTTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 10025
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| || || |||||| || | | | || | ||||| | | || ||
Sbjct 10024 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCCAC 9965
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | |||||||| || || ||||||||||| |||||
Sbjct 9964 CTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 9917
>seq2385
Length=44452
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
|||| ||| | || || || ||||||||||||||||| ||| | | ||||| |||| ||
Sbjct 35086 ACCAGATGCAGGGTCGACTCCTTTTGAATATTGTAGTCTGCT-AGGGTGCGCCCGTCCTC 35028
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||||| || || || | ||||| | ||| || ||||| || | |||||||| ||
Sbjct 35027 AAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCTTTGTCCTG 34968
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||| || | | | || | ||||||| | |||||| || || || || | ||
Sbjct 34967 AATCTTTGCCTTGACGTTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTAATGGTCTT 34908
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| ||||| || || |||||||| |||||
Sbjct 34907 GCCAGTCAGGGTCTTGACAAAGATCTGCAT 34878
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109
|||||| || ||||| || ||||| || || |||| | || || ||||| || ||
Sbjct 34847 CGTAGATTCCTTTTGGATGTTGTAATCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTCCC 34788
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
|| ||||||| | || || ||||| || | ||||| || || ||||||| ||
Sbjct 34787 TGCAAAAATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTT 34728
Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229
| | || | ||||| | | ||||| || || || || | |||||| ||||| ||
Sbjct 34727 AACATTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATCGTTTTGCCAGTCAGCGT 34668
Query 27230 TTTCACAAAGATTTGCATA 27248
||||||||||| ||||||
Sbjct 34667 CTTCACAAAGATCTGCATA 34649
>seq2700
Length=42081
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || || |||||| | | |||| | || |||||||| || |||
Sbjct 28808 GTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTTCCG 28749
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| ||||| || |||||||| | ||| || || || ||||||| |||
Sbjct 28748 GCGAAGATGAGCCGCTGCTGGTCCGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTC 28689
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | | ||||| || || || || | || |||||||| ||
Sbjct 28688 ACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATCGTCTTCCCCGTCAGCGTC 28629
Query 27231 TTCACAAAGATTTGCAT 27247
||||||||||| |||||
Sbjct 28628 TTCACAAAGATCTGCAT 28612
>seq490
Length=81643
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
|||| ||| | || || || ||||||||||||||||| ||| | | ||||| | || ||
Sbjct 59722 ACCAGATGCAGGGTTGACTCCTTTTGAATATTGTAGTCTGCT-AGGGTGCGCCCATCCTC 59664
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||||| || || || | ||||| | |||||| || || || | |||||||| ||
Sbjct 59663 AAGCTGCTTCCCCGCAAAGATGAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTGTCCTG 59604
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|| || || | | || | ||||||| | |||||| || || ||||| | ||
Sbjct 59603 AATTTTTGCCTTGACATTGTCAATGGTGTCTGAAGATTCAACCTCAAGGGTTATGGTCTT 59544
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| |||||||| || || || || ||||||
Sbjct 59543 GCCAGTCAGAGTCTTGACGAATATCTGCATA 59513
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || || | ||| | || | || | ||| || || |||||||| ||||||||
Sbjct 58830 TGCCACCACGAAGCCGAAGCACAAGGTGGAGCGTGGACTCCTTTTGAATGTTGTAGTCAG 58771
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
|| | |||| | || || | || || || || | || |||||||| || ||||| |
Sbjct 58770 CCAGGGTGCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGG 58711
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||||| || || ||||||| || | | || | ||| |||| | ||||
Sbjct 58710 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATAGTATCTGAAGACTCAA 58651
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || ||||| || | ||||| |||| || ||||||||||| |||||
Sbjct 58650 CCTCAAGAGTGATTGTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 58602
>seq263
Length=97214
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || ||||||||||||||| || | |||| | || ||
Sbjct 77869 ACCAAGTGCAGGGTGGATTCCTTCTGAATATTGTAGTCGGCCAAGGTGCGGCCATCCTCA 77928
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | ||||| | ||| |||||||| || | |||||| || || |
Sbjct 77929 AGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGG 77988
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||| | | || | ||||| | | || || || || ||||| | |||
Sbjct 77989 ATTTTGGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACCTCAAGGGTTATGGTCTTG 78048
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || || || ||||| |||||
Sbjct 78049 CCAGTGAGCGTCTTGACGAAGATCTGCAT 78077
>seq564
Length=78751
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| | | |||| |||| ||||| || || |||
Sbjct 11257 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGTCCGTCCTCGAGTTGCTTTCCG 11316
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||||||||| || |||||||| | || || || || ||||| |||
Sbjct 11317 GCGAATATGAGACGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGAATCTTCGCCTTC 11376
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | | || || || || || || | || |||||||| |||
Sbjct 11377 ACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGCGTT 11436
Query 27231 TTCACAAAGATTTGCAT 27247
||||| ||||| |||||
Sbjct 11437 TTCACGAAGATCTGCAT 11453
>seq220
Length=196394
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | || | |||| ||| | || || ||||| ||||| || ||||| |
Sbjct 148772 CCACCGCGGAGACGAAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTATAGTCTGCC 148831
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| ||||| | || || ||||| || || ||| | ||||| | ||| || ||||||||
Sbjct 148832 AAAGTGCGCCCATCCTCCAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGCGGG 148891
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || |||||| |||| | || | |||||| | | || ||
Sbjct 148892 ATCCCCTCCTTGTCTTGGATCTTCGCCTTCACATTATCAATAGTGTCAGAGCTCTCCACC 148951
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | || || || || || ||||| |||||||||||
Sbjct 148952 TCCAGGGTAATGGTCTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 148998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424725763318032
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