Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 176 5e-39
seq7765 174 2e-38
seq32078 170 2e-37
seq4514 145 9e-30
seq4174 143 3e-29
seq2656 143 3e-29
seq70 122 1e-22
seq4518 87.8 2e-12
seq992 87.8 2e-12
>seq2510
Length=43382
Score = 176 bits (194), Expect = 5e-39
Identities = 133/157 (85%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 94788 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847
|||| |||||||||| ||||| || |||| ||||| || || |||||||||||||||||
Sbjct 21072 GTCGAGTTCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTC 21131
Query 94848 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907
|| ||||||||| | || | ||||||||||||||||| |||||||| || || |||
Sbjct 21132 CGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGGCTAACCTT 21191
Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||||||| ||||| ||||||||||||||||||
Sbjct 21192 CTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCAC 21228
>seq7765
Length=42474
Score = 174 bits (192), Expect = 2e-38
Identities = 186/244 (76%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761
|||||| || ||||| || ||| |||| || || || | |||||| || ||
Sbjct 40288 GAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGAC 40229
Query 94762 TGGGCTATGAAGTGGTTTGATACAAA-GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 94820
|||||| || ||| ||| || |||| | |||||||| ||||| || |||| ||
Sbjct 40228 TGGGCTCTGC----GTTGGATCCACTCGTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTT 40173
Query 94821 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 94880
||| || || ||||||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 40172 TGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAA 40113
Query 94881 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 94940
||| || |||||||| || ||| ||||||||||||||| ||||| ||||||||||||||
Sbjct 40112 GCGGGGCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACT 40053
Query 94941 CCAC 94944
||||
Sbjct 40052 CCAC 40049
>seq32078
Length=1569
Score = 170 bits (188), Expect = 2e-37
Identities = 185/244 (76%), Gaps = 5/244 (2%)
Strand=Plus/Plus
Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761
|||||| || ||||| || ||| |||| || || || | |||||| || ||
Sbjct 895 GAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGAAAGAAGGCCGAC 954
Query 94762 TGGGCTATGAAGTGGTTTGATACAAA-GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 94820
|||||| || ||| ||| || |||| | |||||||| ||||| || |||| ||
Sbjct 955 TGGGCTCTGC----GTTGGATCCACTCGTCGAGCTCCTTTGCCGAGCGCATCGTCGCCTT 1010
Query 94821 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 94880
||| || || ||||||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 1011 TGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAA 1070
Query 94881 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 94940
||| || |||||||| || ||| ||||||||||||||| ||||| ||||||||||| ||
Sbjct 1071 GCGGGGCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCT 1130
Query 94941 CCAC 94944
||||
Sbjct 1131 CCAC 1134
>seq4514
Length=32024
Score = 145 bits (160), Expect = 9e-30
Identities = 282/407 (69%), Gaps = 12/407 (3%)
Strand=Plus/Plus
Query 9572 CGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAAAACCATCCATCTCTG 9629
|| || || || || ||||||| ||||| || ||| || |||| ||||||||||| |
Sbjct 21808 CGGTTTGTAGCAGCAATGACAATGATACCAGTATTTCCTT--CAAAGCCATCCATCTCAG 21865
Query 9630 TCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC 9689
| || || ||||||| |||||||||| ||||||||| | | ||| | | |
Sbjct 21866 TTAAGAGCTGGTTAAGTGTTTGTTCCCTTTCATCATTTCCACCTCCAATACCTGTTCCTC 21925
Query 9690 GTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTC-GCGA 9748
|||| |||| || |||||||||||||||| ||| || ||||||||| |||||| |
Sbjct 21926 TTTGCCTTCCAACAGCATCAATCTCATCAACGAAAACAATGCATGGTGCATTTTCTTTGG 21985
Query 9749 GCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAA 9806
| ||| ||| ||||| || || |||| || || ||||||||||||||||| ||||
Sbjct 21986 CCTTCTTGAAA-AGATCACG--AACTCTTGAAGCACCAACACCAACAAACATCTCTACAA 22042
Query 9807 AGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCG 9865
| | | | ||| |||| || || || ||| || |||||| ||||| || ||
Sbjct 22043 ACTCGGAACCAGAA-ATTGAGAAAAATGGAACACCAGCTTCACCAGCAATTGCCTTAGCC 22101
Query 9866 AGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCG 9925
|| || ||||| || || ||||| ||| | || || ||||| ||||| ||
Sbjct 22102 AGCAGTGTCTTCCCAGTGCCTGGGGGACCGACAAGTAGAACACCTTTAGGAATTCGTGCA 22161
Query 9926 CCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972
|| | | | ||||| |||| ||| ||||| ||||| | |||
Sbjct 22162 CCGACAGCGGTGAACCTCTCTGGTTTCTTTAGAAATTCCACCACTTC 22208
>seq4174
Length=33674
Score = 143 bits (158), Expect = 3e-29
Identities = 269/393 (68%), Gaps = 2/393 (1%)
Strand=Plus/Plus
Query 9527 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9586
||||| || || || | ||| || || ||| | ||||| | ||||| || || ||
Sbjct 22944 TCAAAACGTCCAGGCCTAAGAAGAGCAGAATCCAATATATCTGCACGATTGGTGGCTGCA 23003
Query 9587 ATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATA 9646
|| |||| ||||| || | | ||||||||||||||||| ||||||||||| || | |
Sbjct 23004 ATTACAATTATACCAGTATTACCCTCAAAACCATCCATCTCGGTCAAAAGTTGATTTAGA 23063
Query 9647 GTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCA 9706
|| ||||| | ||||||||| || | | || | | | ||| | || || |||
Sbjct 23064 GTCTGTTCTCTTTCATCATTTCCTCCCCCAATGCCTGTTCCTCTTTGTCTCCCAACAGCA 23123
Query 9707 TCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCC 9766
||||| || |||| || || || || ||| ||| || || || || |||||
Sbjct 23124 TCAATTTCGTCAACAAAAACAATACAAGGTGCATTCTCTTTTGCCTTTTTGAAAAGATCA 23183
Query 9767 CGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG- 9825
|| || || || || ||||||||||||||||| ||||| | || | ||| || |
Sbjct 23184 CGGACTCGTGAAGCACCGACACCAACAAACATCTCAACAAATTCTGATCCCGAA-ATAGA 23242
Query 9826 GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACC 9885
|| || ||||| || ||||| ||||| ||| || ||||||||||| || || ||
Sbjct 23243 GAAAAATGGGACTCCAGCCTCACCTGCAATAGCTTTAGCAAGAAGAGTCTTTCCAGTCCC 23302
Query 9886 TGGCTTACCCGCGAGGAGGGCACCTCGTGGAAT 9918
||| ||| | ||||| ||||| |||||
Sbjct 23303 TGGAGGACCAACAAGGAGAACACCTTTAGGAAT 23335
>seq2656
Length=42395
Score = 143 bits (158), Expect = 3e-29
Identities = 126/157 (80%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 94788 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847
|||| ||||| || ||||| ||| | || || || || || || || |||||||||||
Sbjct 41836 GTCGGATTCCTACGCCGAGCGCCTCGTTGCCTTCGCCTGCGTCGAAGGCATCTTCTTCTC 41777
Query 94848 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907
|| ||||||||||| || | |||||||||||||| || |||||||| || ||| ||
Sbjct 41776 CGGCTCCTTCTGCGCAATCTTCTGGCTCAAGAAGCGCGGACTCATGCCTGGCCTCACGTT 41717
Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||||||| |||||||| |||||||| ||||||
Sbjct 41716 CTCCAACGAGCTCATCTCTCGCGACGAGGGCCTCCAC 41680
>seq70
Length=129315
Score = 122 bits (134), Expect = 1e-22
Identities = 279/409 (68%), Gaps = 16/409 (4%)
Strand=Plus/Plus
Query 9572 CGATTCGTCGCGGCGATGACAACAATACC--TGTTTCATTATCAAAACCATCCATCTCTG 9629
|| || || || || || |||| | ||| |||||| || |||| ||||||||||| |
Sbjct 36480 CGGTTTGTAGCTGCAATAACAATGACACCAGTGTTTCCTT--CAAAGCCATCCATCTCAG 36537
Query 9630 TCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACT 9687
| || || ||||||| |||||||| | |||||||| | | | | | || || |
Sbjct 36538 TTAAGAGCTGGTTAAGCGTTTGTTCTCTCTCATCATTTCC--ACCTCCAATTCCTGCTCC 36595
Query 9688 GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTC-GC 9746
| |||| |||| || |||||||| ||||||| ||| || ||||||||| ||||||
Sbjct 36596 TCTTTGCCTTCCAACTGCATCAATTTCATCAACGAAAACAATGCATGGTGCATTTTCTTT 36655
Query 9747 GAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCAC 9804
| | ||| ||| || || || || |||| || || || || ||||||||||| ||
Sbjct 36656 GGCCTTCTTGAAA-AGTTCACG--AACTCTTGAAGCACCAACGCCGACAAACATCTCTAC 36712
Query 9805 AAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGG 9863
||| | | | ||| |||| || || || ||| || |||||| || || || |
Sbjct 36713 AAACTCAGAACCTGAA-ATTGAGAAAAATGGAACACCAGCTTCACCGGCGATTGCCTTAG 36771
Query 9864 CGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGG 9923
| || || ||||| || ||||| || ||| | || || ||||| ||||| |
Sbjct 36772 CCAGCAGTGTCTTCCCAGTACCCGGAGGACCAACAAGAAGAACACCTTTAGGAATTCGTG 36831
Query 9924 CGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972
| || | || | | ||||| |||| ||| ||||| || |||| |||
Sbjct 36832 CACCGACTGCAGTGAACCTCTCTGGTTTCTTCAGAAATTCTACAACTTC 36880
>seq4518
Length=32015
Score = 87.8 bits (96), Expect = 2e-12
Identities = 218/323 (67%), Gaps = 11/323 (3%)
Strand=Plus/Plus
Query 9612 CAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGC-- 9669
||||||||||||||||| | | || || | ||| ||| ||||||||||| ||
Sbjct 19086 CAAAACCATCCATCTCTACAAGCAACTGATTTAGAGTGCTTTCACGTTCATCATTTGCAC 19145
Query 9670 -TGGCATACCACCAGCACTGCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACG 9727
|| | ||| ||| | | ||||| ||| |||||||| |||||||| || |
Sbjct 19146 CTGAGAAACCTCCACGGCCTC-TTGCTCGACCAATCGCATCAATTTCATCAATAAATATT 19204
Query 9728 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCG--CCCA 9785
|| | ||| | | | ||| ||| ||| | || |||||| | ||| | || |
Sbjct 19205 ATACTGGGTGCACACTGCCTAGCTTCTTGAAACAAATTCCGTACTC--TTGCTGGTCCAA 19262
Query 9786 CACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGG-ATGAAGGGGACATTAGAT 9844
||||||||||||| |||| ||| | | |||| |||| | ||||| |||| |||
Sbjct 19263 CACCAACAAACATTTCCAGAAAATCCGAACCGGAT-ATTGACAAAAAGGGCACATCAGAC 19321
Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904
||||| ||| | ||| | ||||||||||| |||||||| || || | || |||
Sbjct 19322 TCACCTGCAGTTGCTTTAGAAAGAAGAGTCTTTCCCGTACCAGGAGGTCCAACAAGAAGG 19381
Query 9905 GCACCTCGTGGAATCTTGGCGCC 9927
|||||| ||||| || || ||
Sbjct 19382 GCACCTTTAGGAATTTTAGCTCC 19404
>seq992
Length=120957
Score = 87.8 bits (96), Expect = 2e-12
Identities = 238/358 (66%), Gaps = 10/358 (3%)
Strand=Plus/Minus
Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673
|| ||||||||||||||||| || || || || || || || | || || || | |
Sbjct 3160 AACCCATCCATCTCTGTCAATAGCTGATTGATTGTCTGCTCTCTCTCGTCGTTTCCA--C 3103
Query 9674 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 9731
| | | || |||| || ||| ||||||| |||||||| ||||| ||||| || ||||
Sbjct 3102 CTCCAAGCCCGGCACCACGCTGCCTTCCCACAGCATCAATTTCATCTATGAACACAATGC 3043
Query 9732 ATGGTTGATTTTCGCGAGCGACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACC 9789
| || | |||| || |||| || | ||||| || | | ||| ||||| ||
Sbjct 3042 AGGG--GGCCTTCGATTTCGCCTTCTCGAACAAGTCCCGGACTCTCGAGGCACCCACTCC 2985
Query 9790 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9849
||||||| || || || | | || | |||| || |||||| || | || ||
Sbjct 2984 CACAAACAATTCAACGAACTCGGATGCCGCACATGAGAAGAAGGGCACGCCGGCCTCCCC 2925
Query 9850 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 9909
|| | || | ||| || ||||||||||| || || ||| || | | || |||| |
Sbjct 2924 GGCCACTGCCCTGGCCAGCAGAGTCTTACCAGTTCCGGGCGGCCCGACCAAGA-GGCAGC 2866
Query 9910 TCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966
| | || ||||| || || | | ||| | ||||| | ||| || ||||||||
Sbjct 2865 CCTTGGGGATCTTTGCTCCGAGTGCGGTGTACTTGTCAGGGTTCTTGAGGAAATCCAC 2808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582967084442640
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