Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 206 3e-48
seq32078 194 2e-44
seq7765 194 2e-44
seq2656 176 5e-39
>seq2510
Length=43382
Score = 206 bits (228), Expect = 3e-48
Identities = 577/867 (67%), Gaps = 39/867 (4%)
Strand=Plus/Plus
Query 59573 GTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGA 59632
|||||||| | |||| | || ||||| ||| | | || |||||| ||| |||||
Sbjct 20679 GTACCCGGCGGTCTGGGAGTTCTACAAGAAGGCGGTTGCCTCCTTCTGGACCGCGGAGGA 20738
Query 59633 GATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCA 59689
| | |||||| ||| || || | ||| |||| | |||| |||||||| |
Sbjct 20739 GGTCGACCTCTCCGCTGATCTCGTCCACTGGAACAACCGCCTCAACGCCGACGAGCGCCG 20798
Query 59690 TTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATAT 59749
||| || ||||| ||||||||||| ||| || || || || | || || |
Sbjct 20799 CTTCGTCTCCCACGTCCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCT 20858
Query 59750 AGACATGAACTTT---TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTA 59806
| | ||| ||| || || || | |||||||||| | ||||||| |
Sbjct 20859 CGCCGGCCGCTTCATGTCC---GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTT 20915
Query 59807 TCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGG 59865
||| ||| || |||| ||||||||||||| |||||| ||| | |||| | |
Sbjct 20916 CCAGATCGC-CATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACA 20974
Query 59866 TCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTT 59924
||||||| | || |||||| | | || ||||| || || ||||| |||||| || ||
Sbjct 20975 TCAAGGACTCCGAGGAGAAGTCGCGCCTCTTCCGCGCGATCGAGACCGTCCCCTGC-GTC 21033
Query 59925 AAACAAAAAGCAGAATGGGCCATGCAGTGGATG-AGTCCTGGAGCATCATTTGCACAACG 59983
| | || || || ||||| ||| ||||| | || | ||| || ||||| | ||
Sbjct 21034 GGAAAGAAGGCCGAGTGGGCGCTGCGTTGGATCCACTCGTCGAGT-TCCTTTGCCGAGCG 21092
Query 59984 TCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTT 60043
|| | || ||||| ||||| || || ||||||||||| ||||| ||||| | || ||
Sbjct 21093 CATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCTGCTCCATCTT 21152
Query 60044 CTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCG 60103
||||||||| ||||| ||||||||||| || || | |||||||||||||| || |||||
Sbjct 21153 CTGGCTCAAGAAGCGAGGCCTCATGCCTGGGCTAACCTTCTCCAACGAGCTCATCTCCCG 21212
Query 60104 GGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTATTGGA----AA 60159
|||||||| ||||| || || || || | | || | || ||| || | ||
Sbjct 21213 TGACGAGGGACTCCACTGCGACTTCGC-CTGCCTC-CTCTACA-GCCTCCTGAACAACAA 21269
Query 60160 AATGCCCTTCCAAGGATATTCACAAG---ATTGTTCAGTGGGCTTGTGAAGTGGAGAGCG 60216
| ||| || |||| | ||| || || | || || | || | |
Sbjct 21270 ATTGC----CCGAGGAAAAAGTGAAGTCTATCGTGGAAGACGCCGTCGATATCGAACGGG 21325
Query 60217 AGTTCATCACAGAAGCGCTTCCA--TGCAAACTCATAGGTATGGACGCTGGAGAAATGAC 60274
| ||| | || ||| | ||| ||| ||| | |||||| ||| | ||||
Sbjct 21326 AATTCGTGTGTGACGCGTTGCCAGTTGC--ACTGGTGGGTATGAACGGGGTTCTGATGAG 21383
Query 60275 GCAGTACATTCAGTTTGTCGCGGACCG---CCTCATGGCCCAGTTTGGAGAAGGACCAAT 60331
||||||||| | || ||||||||||| | ||||| | |||| | | ||
Sbjct 21384 TCAGTACATTGAATTCGTCGCGGACCGGTTGATGATGGCTC---TTGGCTACAGCAAGAT 21440
Query 60332 TTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAA 60391
||| ||||| | || ||||| |||||||||||| |||||||||| | ||||| || ||
Sbjct 21441 TTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGGGGAAAACTAA 21500
Query 60392 CTTCTTTGAGAAGCGGGTCGGGGATTA 60418
||||||||||| | ||||| |||||
Sbjct 21501 TTTCTTTGAGAAAAGAGTCGGCGATTA 21527
Score = 114 bits (126), Expect = 1e-20
Identities = 312/468 (67%), Gaps = 15/468 (3%)
Strand=Plus/Plus
Query 59573 GTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGA 59632
|||||||| | |||| | |||||||| ||| | | || |||||| ||| |||||
Sbjct 19930 GTACCCGGCGGTCTGGGAGTTCTATAAGAAGGCGGTTGCCTCCTTCTGGACCGCGGAGGA 19989
Query 59633 GATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCA 59689
| | |||||| ||| || || | ||| |||| | |||| |||||||| |
Sbjct 19990 GGTCGACCTCTCCGCCGATCTCGCCCACTGGAACAACCGCCTCAACGCCGACGAGCGCCG 20049
Query 59690 TTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATAT 59749
||| || ||||| ||||||||||| ||| || || || || | || || |
Sbjct 20050 CTTCGTCTCCCACGTCCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCT 20109
Query 59750 AGACATGAACTTT---TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTA 59806
| | ||| ||| || || || | |||||||||| | ||||||| |
Sbjct 20110 CGCCGGCCGCTTCATGTCC---GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTT 20166
Query 59807 TCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGG 59865
||| ||| || |||| ||||||||||||| |||||| ||| | |||| | |
Sbjct 20167 CCAGATCGC-CATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACA 20225
Query 59866 TCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGA-CGTCCCCCGCAGTT 59924
||||||| | || |||||| | | || ||||| || || || | ||||||| || ||
Sbjct 20226 TCAAGGACTCCGAGGAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGC-GTC 20284
Query 59925 AAACAAAAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACG 59983
| | || || || ||||| ||| ||||| | || | |||| || ||||| | ||
Sbjct 20285 GGAAAGAAGGCCGACTGGGCTCTGCGTTGGATCCACTCGTCGAGC-TCCTTTGCCGAGCG 20343
Query 59984 TCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031
|| | || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct 20344 CATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTT 20391
>seq32078
Length=1569
Score = 194 bits (214), Expect = 2e-44
Identities = 382/555 (69%), Gaps = 15/555 (3%)
Strand=Plus/Plus
Query 59573 GTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGA 59632
|||||||| | |||| | || ||||| ||| | | || |||||| ||| |||||
Sbjct 585 GTACCCGGCGGTCTGGGAGTTCTACAAGAAGGCGGTTGCCTCCTTCTGGACCGCGGAGGA 644
Query 59633 GATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCA 59689
| | |||||| ||| || || | ||| |||| | |||| |||||||| |
Sbjct 645 GGTCGACCTCTCCGCTGATCTCGTCCACTGGAACAACCGCCTCAACGCCGACGAGCGCCG 704
Query 59690 TTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATAT 59749
||| || ||||| ||||||||||| ||| || || || || | || || |
Sbjct 705 CTTCGTCTCCCACGTCCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCT 764
Query 59750 AGACATGAACTTT---TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTA 59806
| | ||| ||| || || || | |||||||||| | ||||||| |
Sbjct 765 CGCCGGCCGCTTCATGTCC---GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTT 821
Query 59807 TCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGG 59865
||| ||| || |||| ||||||||||||| |||||| ||| | |||| | |
Sbjct 822 CCAGATCGC-CATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACA 880
Query 59866 TCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTT 59924
||||||| | || |||||| | | || ||||| || || || || |||||| || ||
Sbjct 881 TCAAGGACTCCGAGGAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGC-GTC 939
Query 59925 AAACAAAAAGCAGAATGGGCCATGCAGTGGATG-AGTCCTGGAGCATCATTTGCACAACG 59983
| | || || || ||||| ||| ||||| | || | |||| || ||||| | ||
Sbjct 940 GGAAAGAAGGCCGACTGGGCTCTGCGTTGGATCCACTCGTCGAGC-TCCTTTGCCGAGCG 998
Query 59984 TCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTT 60043
|| | || ||||| ||||| || || ||||||||||| ||||| || || | || ||
Sbjct 999 CATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTT 1058
Query 60044 CTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCG 60103
||||||||| ||||| ||||||||||| || || | |||||||||||||| || |||||
Sbjct 1059 CTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCG 1118
Query 60104 GGACGAGGGCCTCCA 60118
|||||||| |||||
Sbjct 1119 TGACGAGGGTCTCCA 1133
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389
||||| ||||| | || ||||| |||||||||||| |||||||||| | ||||| ||
Sbjct 1345 ATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGGGGAAAACT 1404
Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
|| ||||||||||| | ||||| |||||
Sbjct 1405 AATTTCTTTGAGAAAAGAGTCGGCGATTA 1433
>seq7765
Length=42474
Score = 194 bits (214), Expect = 2e-44
Identities = 382/555 (69%), Gaps = 15/555 (3%)
Strand=Plus/Minus
Query 59573 GTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGA 59632
|||||||| | |||| | || ||||| ||| | | || |||||| ||| |||||
Sbjct 40598 GTACCCGGCGGTCTGGGAGTTCTACAAGAAGGCGGTTGCCTCCTTCTGGACCGCGGAGGA 40539
Query 59633 GATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCA 59689
| | |||||| ||| || || | ||| |||| | |||| |||||||| |
Sbjct 40538 GGTCGACCTCTCCGCTGATCTCGTCCACTGGAACAACCGCCTCAACGCCGACGAGCGCCG 40479
Query 59690 TTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATAT 59749
||| || ||||| ||||||||||| ||| || || || || | || || |
Sbjct 40478 CTTCGTCTCCCACGTCCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCT 40419
Query 59750 AGACATGAACTTT---TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTA 59806
| | ||| ||| || || || | |||||||||| | ||||||| |
Sbjct 40418 CGCCGGCCGCTTCATGTCC---GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTT 40362
Query 59807 TCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGG 59865
||| ||| || |||| ||||||||||||| |||||| ||| | |||| | |
Sbjct 40361 CCAGATCGC-CATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACA 40303
Query 59866 TCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTT 59924
||||||| | || |||||| | | || ||||| || || || || |||||| || ||
Sbjct 40302 TCAAGGACTCCGAGGAGAAGTCGCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGC-GTC 40244
Query 59925 AAACAAAAAGCAGAATGGGCCATGCAGTGGATG-AGTCCTGGAGCATCATTTGCACAACG 59983
| | || || || ||||| ||| ||||| | || | |||| || ||||| | ||
Sbjct 40243 GGAAAGAAGGCCGACTGGGCTCTGCGTTGGATCCACTCGTCGAGC-TCCTTTGCCGAGCG 40185
Query 59984 TCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTT 60043
|| | || ||||| ||||| || || ||||||||||| ||||| || || | || ||
Sbjct 40184 CATCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTT 40125
Query 60044 CTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCG 60103
||||||||| ||||| ||||||||||| || || | |||||||||||||| || |||||
Sbjct 40124 CTGGCTCAAGAAGCGGGGCCTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCG 40065
Query 60104 GGACGAGGGCCTCCA 60118
|||||||| |||||
Sbjct 40064 TGACGAGGGACTCCA 40050
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389
||||| ||||| | || ||||| |||||||||||| |||||||||| | ||||| ||
Sbjct 39838 ATTTATGGCGTCACGAATCCTTTTGACTGGATGGAGCTCATCTCGTTGCAGGGGAAAACT 39779
Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
|| ||||||||||| | ||||| |||||
Sbjct 39778 AATTTCTTTGAGAAAAGAGTCGGCGATTA 39750
>seq2656
Length=42395
Score = 176 bits (194), Expect = 5e-39
Identities = 253/354 (71%), Gaps = 2/354 (1%)
Strand=Plus/Minus
Query 59766 AAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCT 59825
|| || || ||| | | ||||| || | ||||||| || ||| || ||||
Sbjct 42033 AACGACGTGCAGCTCCCGGAGGCGCGCGCCTTCTACGGGTTCCAGATTGCCATCGAGAAC 41974
Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAG 59885
||||||||||||| |||||| ||| | |||| | ||||||| ||||| ||||||
Sbjct 41973 ATCCACTCCGAGATGTACTCCCTCCTCCTCGAGTCTTATATCAAGGACCCGGACGAGAAG 41914
Query 59886 GCTGGTCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTTAAACAAAAAGCAGAATGGGC 59944
| | || ||||| || || ||||| |||||| || || | || || || |||||
Sbjct 41913 ACCCGCCTCTTCCGGGCGATCGAGACCGTCCCCTGC-GTCGGCAAGAAGGCCGACTGGGC 41855
Query 59945 CATGCAGTGGATGAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGT 60004
| | ||||| || | | || | || | || ||| | || || || |||||
Sbjct 41854 GGTCCGCTGGATCCGTTCGTCGGATTCCTACGCCGAGCGCCTCGTTGCCTTCGCCTGCGT 41795
Query 60005 GGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCT 60064
||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||| || ||
Sbjct 41794 CGAAGGCATCTTCTTCTCCGGCTCCTTCTGCGCAATCTTCTGGCTCAAGAAGCGCGGACT 41735
Query 60065 CATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
|||||| ||||| | |||||||||||||| || || || ||||||||||||||
Sbjct 41734 CATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCTCGCGACGAGGGCCTCCA 41681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548248576623840
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