Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2656 156 5e-33
seq32078 134 2e-26
seq7765 134 2e-26
seq2510 129 6e-25
seq5339 87.8 2e-12
seq1478 87.8 2e-12
seq151 86.0 7e-12
seq45 86.0 7e-12
seq1629 84.2 2e-11
seq138 84.2 2e-11
>seq2656
Length=42395
Score = 156 bits (172), Expect = 5e-33
Identities = 296/429 (69%), Gaps = 14/429 (3%)
Strand=Plus/Plus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849
|| || || |||| ||||||||||| ||||| |||||||| | ||| ||||| || |||
Sbjct 41708 TCGTTGGAGAACGTGAGGCCAGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATTGCGCAG 41767
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909
||||| || |||||||||||||||||| || || ||||| || ||||| | ||| |
Sbjct 41768 AAGGAGCCGGAGAAGAAGATGCCTTCGACGCAGGCGAAGGCAACGAGGCGCTCGGCGTAG 41827
Query 74910 GGTGCATCGGAAGTCATCCAAGTCTGA--GCCCATTCAGCTTTTCGTTTGAC--CGCA-G 74964
| | ||| ||||| | || ||||| || || || ||| | |||| |
Sbjct 41828 GAATCCGACGAACGGATCCA--GCGGACCGCCCAGTCGGCCTT---CTTGCCGACGCAGG 41882
Query 74965 GGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGT 75024
|||| || |||||||| ||||||||| | |||||| || || ||||||| |
Sbjct 41883 GGACGGTCTCGATCGCCCGGAAGAGGCGGGTCTTCTCGTCCGGGTCCTTGATATAAGACT 41942
Query 75025 CAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGA 75084
| | | || |||||| |||| || || || |||| || |||| || ||||||
Sbjct 41943 CGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATGGCAATCTGGAACCCGTAGA 42002
Query 75085 AAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCCAT 75142
| | |||||||| | | ||| || || || |||| | | ||| ||||| |
Sbjct 42003 AGGCGCGCGCCTCCGGGAGCTGCACGTCGTTCATGAACCGGGC--GGCGAGGTTCTCGAG 42060
Query 75143 GACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATC 75202
||||||||||| ||||||||||| || || || || ||| |||||||| || ||
Sbjct 42061 AACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGGCGATCGTC 42120
Query 75203 GTCAGTGAG 75211
||| || ||
Sbjct 42121 GTCCGTCAG 42129
>seq32078
Length=1569
Score = 134 bits (148), Expect = 2e-26
Identities = 284/413 (69%), Gaps = 12/413 (3%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| |||||||| || || |||||||| | ||| ||||||| || ||||| || ||||
Sbjct 1091 AGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAG 1032
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCG--GAAG 74922
||||| || ||||| || ||||||||||| | ||| | || || || || ||| ||
Sbjct 1031 AAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCT-CGGCAAAGGAGC-TCGACGAGT 974
Query 74923 TCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCT 74981
|||||| | ||||||| || || ||| || |||| ||||| || ||||||||
Sbjct 973 GGATCCAACGCAGAGCCCAGTCGGC-CTTCTTTCCGACGCAGGGGACGGTTTCGATCGCG 915
Query 74982 TGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTAC 75041
||||||||| | |||||| |||| ||||||| | | || | | || ||||||
Sbjct 914 CGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCGAGGAGGAGGGAGTAC 855
Query 75042 GTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGC 75100
|||| || || || |||| || ||| |||| | ||||||| | || ||||| |
Sbjct 854 ATCTCGGAGTGGATGTTCTCGATG-GCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGG 796
Query 75101 AATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAG 75158
| || || || |||| | | ||| ||||| | |||||||||||| ||
Sbjct 795 GACTTGCACGTCGGACATGAAGCGGCC--GGCGAGGTTCTCGAGGACGATGCCGTCGGAC 738
Query 75159 GCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG 75211
|||||||| || || || || || ||| ||||||| ||| | ||||
Sbjct 737 GCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGCGGCGCTCGTCGGCGTTGAG 685
>seq7765
Length=42474
Score = 134 bits (148), Expect = 2e-26
Identities = 284/413 (69%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| |||||||| || || |||||||| | ||| ||||||| || ||||| || ||||
Sbjct 40092 AGCCCAGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAG 40151
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCG--GAAG 74922
||||| || ||||| || ||||||||||| | ||| | || || || || ||| ||
Sbjct 40152 AAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCT-CGGCAAAGGAGC-TCGACGAGT 40209
Query 74923 TCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCT 74981
|||||| | ||||||| || || ||| || |||| ||||| || ||||||||
Sbjct 40210 GGATCCAACGCAGAGCCCAGTCGGC-CTTCTTTCCGACGCAGGGGACGGTTTCGATCGCG 40268
Query 74982 TGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTAC 75041
||||||||| | |||||| |||| ||||||| | | || | | || ||||||
Sbjct 40269 CGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCGAGGAGGAGGGAGTAC 40328
Query 75042 GTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGC 75100
|||| || || || |||| || ||| |||| | ||||||| | || ||||| |
Sbjct 40329 ATCTCGGAGTGGATGTTCTCGATG-GCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGG 40387
Query 75101 AATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAG 75158
| || || || |||| | | ||| ||||| | |||||||||||| ||
Sbjct 40388 GACTTGCACGTCGGACATGAAGCGGCC--GGCGAGGTTCTCGAGGACGATGCCGTCGGAC 40445
Query 75159 GCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG 75211
|||||||| || || || || || ||| ||||||| ||| | ||||
Sbjct 40446 GCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGCGGCGCTCGTCGGCGTTGAG 40498
>seq2510
Length=43382
Score = 129 bits (142), Expect = 6e-25
Identities = 283/413 (69%), Gaps = 12/413 (3%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| |||||||| || || |||||||| | ||| ||||||| |||||||| || ||||
Sbjct 21185 AGCCCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAG 21126
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCG--GAAG 74922
||||| || ||||| || ||||||||||| | ||| | || || || | ||| ||
Sbjct 21125 AAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCT-CGGCAAAGGAAC-TCGACGAGT 21068
Query 74923 TCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCT 74981
|||||| | | ||||| || || ||| || |||| ||||| || ||||||||
Sbjct 21067 GGATCCAACGCAGCGCCCACTCGGC-CTTCTTTCCGACGCAGGGGACGGTCTCGATCGCG 21009
Query 74982 TGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTAC 75041
||||||||| | |||||| |||| ||||||| | | || | | || ||||||
Sbjct 21008 CGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCGAGGAGGAGGGAGTAC 20949
Query 75042 GTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGC 75100
|||| || || || |||| || ||| |||| | ||||||| | || ||||| |
Sbjct 20948 ATCTCGGAGTGGATGTTCTCGATG-GCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGG 20890
Query 75101 AATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAG 75158
| || || || |||| | | ||| ||||| | |||||||||||| ||
Sbjct 20889 GACTTGCACGTCGGACATGAAGCGGCC--GGCGAGGTTCTCGAGGACGATGCCGTCGGAC 20832
Query 75159 GCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG 75211
|||||||| || || || || || ||| ||||||| ||| | ||||
Sbjct 20831 GCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGCGGCGCTCGTCGGCGTTGAG 20779
Score = 98.7 bits (108), Expect = 1e-15
Identities = 249/368 (68%), Gaps = 12/368 (3%)
Strand=Plus/Minus
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909
||||| || ||||||||| || ||||| || ||||||||||| | ||| | || ||
Sbjct 20391 AAGGAGCCGGAGAAGAAGATACCCTCGACGCAGGCAAAGGCGACGATGCGCT-CGGCAAA 20333
Query 74910 GGTGCATCG--GAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGG 74966
|| || ||| || |||||| | ||||||| || || ||| || |||| |||
Sbjct 20332 GGAGC-TCGACGAGTGGATCCAACGCAGAGCCCAGTCGGC-CTTCTTTCCGACGCAGGGG 20275
Query 74967 ACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCA 75026
|| || |||||||| ||||||||| | |||||| |||| ||||||| | | ||
Sbjct 20274 ACGGTTTCGATCGCGCGGAAGAGGCGCGACTTCTCCTCGGAGTCCTTGATGTAGGTCTCG 20215
Query 75027 ATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAA 75085
| | || |||||| |||| || || || |||| || ||| |||| | |||||||
Sbjct 20214 AGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATG-GCGATCTGGAAGCCGTAGAA 20156
Query 75086 AGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATG 75143
| || ||||| | | || || || |||| | | ||| ||||| | |
Sbjct 20155 GGCGCGGGCCTCGGGGACTTGCACGTCGGACATGAAGCGGCC--GGCGAGGTTCTCGAGG 20098
Query 75144 ACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCG 75203
||||||||||| || |||||||| || || || || || ||| ||||||| |||
Sbjct 20097 ACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGCGGCGCTCGTCG 20038
Query 75204 TCAGTGAG 75211
| ||||
Sbjct 20037 GCGTTGAG 20030
>seq5339
Length=28842
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 6588 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 6529
Query 79684 TGAGCTACGAAAGCA 79698
||||||| |||||||
Sbjct 6528 TGAGCTATGAAAGCA 6514
>seq1478
Length=63443
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 9565 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 9624
Query 79684 TGAGCTACGAAAGCA 79698
||||||| |||||||
Sbjct 9625 TGAGCTATGAAAGCA 9639
>seq151
Length=110950
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 71193 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 71134
Query 79684 TGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 71133 TGAGCTATGAAAGC 71120
>seq45
Length=181720
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 158326 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 158385
Query 79684 TGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 158386 TGAGCTATGAAAGC 158399
>seq1629
Length=52694
Score = 84.2 bits (92), Expect = 2e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682
|||||||| |||| | || |||| ||||||||||||||||||||||||||| |||||
Sbjct 8426 CTGCTTTCATTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 8485
Query 79683 TTGAGCTACGAAAGCA 79698
||||||| |||||||
Sbjct 8486 CTGAGCTATGAAAGCA 8501
>seq138
Length=112799
Score = 84.2 bits (92), Expect = 2e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 79623 ACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCA 79681
|||||| || |||| ||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct 82669 ACTGCTCTCATTGAGATTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCA 82728
Query 79682 ATTGAGCTACGAAAGC 79697
| ||||||| || |||
Sbjct 82729 ACTGAGCTATGAGAGC 82744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546940435702800
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