Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2385 127 2e-24 seq490 127 2e-24 seq263 100 2e-16 seq410 98.7 9e-16 seq5010 91.5 1e-13 seq220 82.4 7e-11 >seq2385 Length=44452 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | ||||| ||||| || ||| | || Sbjct 34878 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAATCTTCA 34937 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| ||||| |||||||| ||||| || || || || Sbjct 34938 GACACCATTGACAACGTCAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCGGACCAG 34997 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || ||| | ||| | | || ||||| Sbjct 34998 CAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGACGGGCGCACCCTAGCAGACTACAAT 35057 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||||||||||||||| | ||| ||||| | || | || |||||| Sbjct 35058 ATTCAAAAGGAGTCGACCCTGCATCTGGTTCTTCGCCTCCGTGGTGGC 35105 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| ||||| | || || ||||| || || | || Sbjct 34422 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34481 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| ||||| || || || ||||| || || ||||| Sbjct 34482 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 34541 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| |||||||| | ||| | | ||||||||| Sbjct 34542 CAGAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAAC 34601 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||| | || | || | || ||||| || Sbjct 34602 ATCCAGAAGGAATCTACGCTTCATCTCGTCCTCCGCCTTCGTGGTGGTAT 34651 >seq490 Length=81643 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || |||||||| |||||| | || || ||||| || ||| | || Sbjct 59514 ATGCAGATATTCGTCAAGACTCTGACTGGCAAGACCATAACCCTTGAGGTTGAATCTTCA 59573 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||||||| |||||||| ||||| || || || ||| Sbjct 59574 GACACCATTGACAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 59633 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || || | ||| | | || ||||| Sbjct 59634 CAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGGCGCACCCTAGCAGACTACAAT 59693 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||||||||||| ||| | ||| ||||| | || | || |||||| Sbjct 59694 ATTCAAAAGGAGTCAACCCTGCATCTGGTTCTTCGCCTCCGTGGTGGC 59741 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || |||| |||||| | || |||||||| || || | || Sbjct 58601 CATGCAGATCTTTGTGAAGACCTTGACAGGCAAGACAATCACTCTTGAGGTTGAGTCTTC 58660 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | ||||| || || || ||||| || || || || || || || Sbjct 58661 AGATACTATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCA 58720 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | || ||||| |||||||| || || ||| | | || ||||| Sbjct 58721 GCAGCGTCTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGCACCCTGGCTGACTACAA 58780 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||| || | || | || | || | || |||||||| Sbjct 58781 CATTCAAAAGGAGTCCACGCTCCACCTTGTGCTTCGGCTTCGTGGTGGCAT 58831 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || |||| || ||| ||||||| ||||| || ||| |||| Sbjct 59058 ATGCAGATATTTGTTAAGACCTTGACTGGTAAGACTATTACCCTTGAGGTTGAATCGTCA 59117 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| ||||| ||||| || ||||| || || || || Sbjct 59118 GACACCATTGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 59177 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| || || || || | ||||| | ||| || | ||||||||| Sbjct 59178 CAAAGACTCATATTTGCAGGGAAGCAGCTCGAAGATGGACGCACCCTTGCTGATTACAAC 59237 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||| || || Sbjct 59238 ATCCAGAAGGAATCTAC 59254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || |||| |||||| |||| || ||||| || || | || Sbjct 58829 CATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATCACCCTTGAGGTTGAGTCCTC 58888 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | |||||| || || || || ||||| ||||| || || || || Sbjct 58889 GGACACCATTGACAATGTCAAAGCGAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCA 58948 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || | | || | || || || || | || || | || || | ||||| || Sbjct 58949 GCAAAGGCTCATCTTTGCAGGGAAGCAGCTTGAGGATGGACGTACTCTTGCTGATTATAA 59008 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||| || || | || | || | ||| | || ||||| || Sbjct 59009 CATTCAAAAGGAATCTACGCTCCACCTTGTCCTCCGTCTCCGTGGTGGTAT 59059 >seq263 Length=97214 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || ||| | ||||| || || Sbjct 78305 ATGCAGATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTTTGGAAGTCGAGAGCTCG 78246 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || || || || ||||| || || || || Sbjct 78245 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAG 78186 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||||||| || | || ||| | ||| | | || |||||| Sbjct 78185 CAGAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCGCAGACTACAAC 78126 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | || |||| | || | || |||||||| Sbjct 78125 ATCCAAAAGGAGTCCACCCTTCACCTGGTGCTCCGCCTCCGTGGTGGCAT 78076 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||||||| | || || || ||||| || || Sbjct 78534 CATGCAGATCTTCGTTAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTTGAGAGCTC 78475 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || || || || ||||| || || || || Sbjct 78474 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCA 78415 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | |||||||| || | || ||| | ||| | | || ||||| Sbjct 78414 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAA 78355 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | || |||| | || | || ||||| || Sbjct 78354 CATCCAGAAGGAGTCAACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGTAT 78304 >seq410 Length=85275 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| | || || ||||| ||||| | || Sbjct 46369 ATGCAGATCTTCGTGAAGACTCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCATCG 46428 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || ||||| || || ||| Sbjct 46429 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGAATACCGCCGGACCAA 46488 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | || | ||||||||||| Sbjct 46489 CAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACACTCGCCGATTACAAC 46548 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 46549 ATCCAGAAGGAGTCCAC 46565 >seq5010 Length=51657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| |||||| | ||||| | || || || ||| Sbjct 38292 ATGCAGATCTTCGTGAAGACTCTGACAGGCAAGACGATTACCTTGGAGGTCGAGAGCTCC 38351 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||| || || ||||| || || || || || Sbjct 38352 GACACCATTGATAACGTGAAGGCCAAGATTCAGGATAAGGAAGGTATCCCCCCGGACCAG 38411 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || | || ||| | ||| || | || |||||| Sbjct 38412 CAGAGGCTTATTTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCGGACTACAAC 38471 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | || |||| | || | || || ||||| Sbjct 38472 ATTCAGAAAGAGTCCACCCTCCACCTGGTGCTCCGCCTCCGTGGCGGCAT 38521 >seq220 Length=196394 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || || || || || || || Sbjct 149226 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTTGAGAGCTCA 149167 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| |||||||| || || ||||| Sbjct 149166 GACACCATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAG 149107 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || | || || | || || | || |||||| Sbjct 149106 CAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGGCGCACTCTTGCTGACTACAAC 149047 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || ||| | || ||||| || | | ||||||| || Sbjct 149046 ATTCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTTAGGGGTGGAAT 148997 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | ||||| || || || || || Sbjct 149454 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATTACCCTCGAGGTTGAGAGCTCT 149395 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || || || ||||| || ||||| || || || || Sbjct 149394 GATACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 149335 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| || ||||| ||| | ||| || | || |||||| Sbjct 149334 CAAAGGCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGCCGCACCCTTGCTGACTACAAC 149275 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || | || | ||| | || ||||| || Sbjct 149274 ATCCAGAAGGAATCCACACTCCACCTCGTCCTCCGTCTTCGTGGTGGTAT 149225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434699385966720