Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 127 2e-24
seq490 127 2e-24
seq263 100 2e-16
seq410 98.7 9e-16
seq5010 91.5 1e-13
seq220 82.4 7e-11
>seq2385
Length=44452
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||| |||||| | ||||| ||||| || ||| | ||
Sbjct 34878 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAATCTTCA 34937
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||| ||||| |||||||| ||||| || || || ||
Sbjct 34938 GACACCATTGACAACGTCAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCGGACCAG 34997
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | || ||| | ||| | | || |||||
Sbjct 34998 CAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGACGGGCGCACCCTAGCAGACTACAAT 35057
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||||||||||||||| | ||| ||||| | || | || ||||||
Sbjct 35058 ATTCAAAAGGAGTCGACCCTGCATCTGGTTCTTCGCCTCCGTGGTGGC 35105
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||| ||||| | || || ||||| || || | ||
Sbjct 34422 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAAACGATCACCCTTGAGGTTGAGTCATCG 34481
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| ||||| || || || ||||| || || |||||
Sbjct 34482 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 34541
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || ||||| |||||||| | ||| | | |||||||||
Sbjct 34542 CAGAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGCGAACCCTCGCTGATTACAAC 34601
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | ||| | || | || | || ||||| ||
Sbjct 34602 ATCCAGAAGGAATCTACGCTTCATCTCGTCCTCCGCCTTCGTGGTGGTAT 34651
>seq490
Length=81643
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || |||||||| |||||| | || || ||||| || ||| | ||
Sbjct 59514 ATGCAGATATTCGTCAAGACTCTGACTGGCAAGACCATAACCCTTGAGGTTGAATCTTCA 59573
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||||||||| |||||||| ||||| || || || |||
Sbjct 59574 GACACCATTGACAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 59633
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | || || | ||| | | || |||||
Sbjct 59634 CAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGGCGCACCCTAGCAGACTACAAT 59693
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||||||||||| ||| | ||| ||||| | || | || ||||||
Sbjct 59694 ATTCAAAAGGAGTCAACCCTGCATCTGGTTCTTCGCCTCCGTGGTGGC 59741
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||| |||||| | || |||||||| || || | ||
Sbjct 58601 CATGCAGATCTTTGTGAAGACCTTGACAGGCAAGACAATCACTCTTGAGGTTGAGTCTTC 58660
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | ||||| || || || ||||| || || || || || || ||
Sbjct 58661 AGATACTATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCA 58720
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | || ||||| |||||||| || || ||| | | || |||||
Sbjct 58721 GCAGCGTCTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGCACCCTGGCTGACTACAA 58780
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||||||| || | || | || | || | || ||||||||
Sbjct 58781 CATTCAAAAGGAGTCCACGCTCCACCTTGTGCTTCGGCTTCGTGGTGGCAT 58831
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || |||| || ||| ||||||| ||||| || ||| ||||
Sbjct 59058 ATGCAGATATTTGTTAAGACCTTGACTGGTAAGACTATTACCCTTGAGGTTGAATCGTCA 59117
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||| ||||| ||||| || ||||| || || || ||
Sbjct 59118 GACACCATTGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 59177
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | |||| || || || || | ||||| | ||| || | |||||||||
Sbjct 59178 CAAAGACTCATATTTGCAGGGAAGCAGCTCGAAGATGGACGCACCCTTGCTGATTACAAC 59237
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || ||||| || ||
Sbjct 59238 ATCCAGAAGGAATCTAC 59254
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||| |||||| |||| || ||||| || || | ||
Sbjct 58829 CATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATCACCCTTGAGGTTGAGTCCTC 58888
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | |||||| || || || || ||||| ||||| || || || ||
Sbjct 58889 GGACACCATTGACAATGTCAAAGCGAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCA 58948
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| | | || | || || || || | || || | || || | ||||| ||
Sbjct 58949 GCAAAGGCTCATCTTTGCAGGGAAGCAGCTTGAGGATGGACGTACTCTTGCTGATTATAA 59008
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||| || || | || | || | ||| | || ||||| ||
Sbjct 59009 CATTCAAAAGGAATCTACGCTCCACCTTGTCCTCCGTCTCCGTGGTGGTAT 59059
>seq263
Length=97214
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||||||| | || ||| | ||||| || ||
Sbjct 78305 ATGCAGATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTTTGGAAGTCGAGAGCTCG 78246
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || || || || ||||| || || || ||
Sbjct 78245 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAG 78186
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||||||| || | || ||| | ||| | | || ||||||
Sbjct 78185 CAGAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCGCAGACTACAAC 78126
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | || |||| | || | || ||||||||
Sbjct 78125 ATCCAAAAGGAGTCCACCCTTCACCTGGTGCTCCGCCTCCGTGGTGGCAT 78076
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||||||||||| | || || || ||||| || ||
Sbjct 78534 CATGCAGATCTTCGTTAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTTGAGAGCTC 78475
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| || || || || || || ||||| || || || ||
Sbjct 78474 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCA 78415
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | |||||||| || | || ||| | ||| | | || |||||
Sbjct 78414 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAA 78355
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || |||| | || | || ||||| ||
Sbjct 78354 CATCCAGAAGGAGTCAACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGTAT 78304
>seq410
Length=85275
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| | || || ||||| ||||| | ||
Sbjct 46369 ATGCAGATCTTCGTGAAGACTCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCATCG 46428
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || ||||| || || ||||| || || |||
Sbjct 46429 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGAATACCGCCGGACCAA 46488
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||||||||| || | || ||| | || | |||||||||||
Sbjct 46489 CAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACACTCGCCGATTACAAC 46548
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||| ||
Sbjct 46549 ATCCAGAAGGAGTCCAC 46565
>seq5010
Length=51657
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || |||||||| |||||| | ||||| | || || || |||
Sbjct 38292 ATGCAGATCTTCGTGAAGACTCTGACAGGCAAGACGATTACCTTGGAGGTCGAGAGCTCC 38351
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| || || ||||| || || || || ||
Sbjct 38352 GACACCATTGATAACGTGAAGGCCAAGATTCAGGATAAGGAAGGTATCCCCCCGGACCAG 38411
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||||| || | || ||| | ||| || | || ||||||
Sbjct 38412 CAGAGGCTTATTTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCGGACTACAAC 38471
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||| | || |||| | || | || || |||||
Sbjct 38472 ATTCAGAAAGAGTCCACCCTCCACCTGGTGCTCCGCCTCCGTGGCGGCAT 38521
>seq220
Length=196394
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || |||||| | || || || || || || ||
Sbjct 149226 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTTGAGAGCTCA 149167
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || ||||| ||||| |||||||| || || |||||
Sbjct 149166 GACACCATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAG 149107
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || || || | || || | || || | || ||||||
Sbjct 149106 CAGAGGCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGGCGCACTCTTGCTGACTACAAC 149047
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || ||| | || ||||| || | | ||||||| ||
Sbjct 149046 ATTCAGAAGGAATCTACCCTCCACTTGGTGCTGAGGCTTAGGGGTGGAAT 148997
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||||||| | ||||| || || || || ||
Sbjct 149454 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATTACCCTCGAGGTTGAGAGCTCT 149395
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || || || || ||||| || ||||| || || || ||
Sbjct 149394 GATACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 149335
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || ||||| || ||||| ||| | ||| || | || ||||||
Sbjct 149334 CAAAGGCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGCCGCACCCTTGCTGACTACAAC 149275
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || | || | ||| | || ||||| ||
Sbjct 149274 ATCCAGAAGGAATCCACACTCCACCTCGTCCTCCGTCTTCGTGGTGGTAT 149225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434699385966720
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