Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq2845 87.8 6e-13 seq1579 87.8 6e-13 seq297 87.8 6e-13 >seq2845 Length=54259 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 1010 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 1069 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 1070 CTGTCTCCGCAAC 1082 >seq1579 Length=164942 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 156005 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 156064 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 156065 CTGTCTCCGCAAC 156077 >seq297 Length=119073 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 2320 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 2261 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 2260 CTGTCTCCGCAAC 2248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162447048745148