Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3117 109 8e-19 >seq3117 Length=39173 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| |||||||| ||||| || || || |||||||||||||| || ||| | |||| Sbjct 14891 AGTGCCTGCATTGAACAAGGTCGGCGAAGCATGAGTGAACCAACGTTGAGACATCAGATG 14950 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||||| || | | || || || || || ||||| |||| || | |||||| Sbjct 14951 GTATGTTCTGATGGCAGACTCAATGTCATCTTTGTGGATTCCAACAGATACTCTCATCAA 15010 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| ||||| |||| || ||| ||| | | |||||||| ||||| |||| | Sbjct 15011 CATGTGCTGCGGTCTCTCCACAACCTTTCCAGAAACTTTCAACAGATATGACCTTTCGAG 15070 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||||||| ||||| |||| || |||||| | || ||||| || Sbjct 15071 AGTTTTAAATCCAAAGTAGTCATAGTCAAAGTCACGGTCATAAATTAT 15118 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 ||||| ||||| | ||| | ||||| | ||| |||| |||| ||| |||| |||||| Sbjct 14555 CCTCCTTGATCAACATAACGTGCAGTATCATTGAAAACCCTCAGCATAGGAACAATGCCA 14614 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 |||||||| |||||||| ||| || ||||| || ||| || || || || || Sbjct 14615 TTAGATGTTCCATTTGTACCACGGATGTAACTACCTGTTGCTCGGATGTTGTGAACTGAA 14674 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || || |||| |||||| || | || ||||||||| Sbjct 14675 ACTCCAATTCCTCCAGCAGACTTGCTTATTATAGCACACTCCTTAAGAGTATCATAGATG 14734 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 ||||| || |||||||| ||||| | || ||||| ||| Sbjct 14735 CCCTCAATGCTATCATCTTTCATGCATATCAGGAAACAACTA 14776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712575384059520