Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq17151 89.7 3e-13 >seq17151 Length=8692 Score = 89.7 bits (98), Expect = 3e-13 Identities = 283/435 (65%), Gaps = 14/435 (3%) Strand=Plus/Plus Query 58576 CCAGACGTAATCGCCGGTTAGGTTGATGTGCTCCCAGCCCAGCGGCGACAGGAATTGCAG 58635 |||||| ||||||||||| || |||||| | ||||| |||| |||||| || ||| Sbjct 3074 CCAGACATAATCGCCGGTGAGATTGATGCGATCCCAACCCAACGGCGAGAGCCGGGACAG 3133 Query 58636 CAGCTCGCCG--TCCACCGG-CTTGCCGGCCTCGACCAACCCCTGGGT----GGCGCGTT 58688 || | || | || | || ||| ||||||| | | | || |||||| Sbjct 3134 CA--TAGCTGGATCGATGGGGCTT-----CCTCGACGACGCATTTCGTCGACGGCGCGCC 3186 Query 58689 CCAGGTACACCGTGTTCCACAGCACGATAGCCGCCGTCACCAGGTTGAGGCCGCTGGCCC 58748 |||| || ||| |||| | || || || || || |||||||| || || | Sbjct 3187 CCAGATAGCGACAGTTGAACAGGATAATCGCTGCGGTGACGAGGTTGAGCGCGGCCGCTC 3246 Query 58749 GGTAGCGCTGCTGCTCGAAGCTCCGATCCCTGATTTCCCCAAGGCGGTTGAAGAACACCG 58808 || |||| | ||| | || || || | | || || || | |||| |||| Sbjct 3247 GGGTCTGCTGGTTCTCCAGGCCACGGTCGCGAAAACGGCCGAGCCGATGGAAGGCGACCG 3306 Query 58809 CCCTGGCCAGCGAGTTGCGCGCCTCACCTTTGTTCAGGCCGGCATGCACGCGGCGGCGCA 58868 ||| ||| || |||||| ||||| || ||||||| ||||| ||| ||||||| Sbjct 3307 CCCGGGCAAGGCTGTTGCGGGCCTCGCCCTTGTTCAACTCGGCAGTGACGGTACGGCGCA 3366 Query 58869 GTTCAACACTTTGCAGCCAGTCCAGGATGAACAGCGTGCGCTCGATCCGGCCCAGCTCGC 58928 | | | | | |||| || ||||||||||||||||||||| || | ||| | Sbjct 3367 GAGCCGGATCCTCGAACCAGCGGAGCCAGAACAGCGTGCGCTCGATCCGCCCGATCTCCC 3426 Query 58929 GCAGGGCCACGGCCAGTCCGTTCTGGCGCGGGTAGCTGCCGAGCTTGCGCAGCATCAGCG 58988 |||| ||| | || || | |||||| | ||||| | ||||| ||| |||| || Sbjct 3427 GCAGCGCCGCAGCGAGGCTGTTCTGCTGGCGGTAGGCGGACAGCTTCTTCAGGATCAACG 3486 Query 58989 AGGCGGTGACGGTGC 59003 | | |||||||||| Sbjct 3487 ATGGCGTGACGGTGC 3501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330736733249476