Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 seq6 86.0 5e-12 >seq7 Length=43454766 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||||| || ||||| ||||| ||||||||||||||||| || | Sbjct 17739034 ACTTGAGCAATCATGCATGTCAAAAGTGAATACGACGCAATGTTAAATGGCACACCAAGA 17738975 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| || || || | ||| |||| ||| || || |||| |||| |||||||| Sbjct 17738974 CCCATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCGCCATTCTCCACATAAAAC 17738915 Query 101876 TG 101877 || Sbjct 17738914 TG 17738913 >seq6 Length=44357769 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||||| || ||||| ||||| ||||||||||||||||| || | Sbjct 2917118 ACTTGAGCAATCATGCATGTCAAAAGTGAATACGATGCAATGTTAAATGGCACACCAAGA 2917177 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| || || || | ||| |||| ||| || || |||| |||| |||||||| Sbjct 2917178 CCCATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCGCCATTCTCCACATAAAAC 2917237 Query 101876 TG 101877 || Sbjct 2917238 TG 2917239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361074821472311