Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 9e-16 seq3 82.4 7e-11 >seq7 Length=43454766 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 38400 TTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTC 38459 ||||||| |||||| || |||||||||||||| ||||| ||||| ||||||| || Sbjct 13983092 TTGAGGCCTTGGAGTGCCTGCGTTAAATAATGTTGGAGAAGCATGAGTGAACCAGCGTTG 13983033 Query 38460 CGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGA 38519 |||| ||| ||||||| | ||| ||| |||||| ||| || || | || Sbjct 13983032 AGACATCAAATGATATGTTCTGAGAACAGAATCAATATCATTCTTGTGGATTCCAACAGC 13982973 Query 38520 TACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTT 38558 || ||||| ||||| |||||||| ||||||| || ||| Sbjct 13982972 AACTCTCATCAGCATGTGTTGTGGCCTTTCTACTACTTT 13982934 >seq3 Length=60060032 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 38401 TGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCC 38460 |||||| |||||| || || |||||||||||||| || ||||| ||||||| || Sbjct 21217975 TGAGGCCTTGGAGTGCCTGCATTAAATAATGTAGGGGAAGCATGAGTGAACCAGCGTTGA 21217916 Query 38461 GACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGAT 38520 |||| ||| |||||| | ||| ||| |||||| | ||| || || | || Sbjct 21217915 GACATCAAATGGTATGTTCTGAGAACAGAATCAATATCATCCTTGTGGATTCCAACAGCA 21217856 Query 38521 ACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTT 38558 || ||||| | ||| |||||||| || |||| || ||| Sbjct 21217855 ACTCTCATCAACATGTGTTGTGGCCTCTCTACTACTTT 21217818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468290180349840