Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 2e-11 >seq14 Length=24379743 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| |||| | | || || |||||||| || || || || ||||||||||| Sbjct 11039442 CCACCCCTCAGCCGCAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCTGCC 11039383 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||| || ||||| | || | ||| || ||||| || Sbjct 11039382 AGCGTGCGTCCATCCTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGG 11039323 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||| ||||| ||| ||| | || ||||| || | || || Sbjct 11039322 ATTCCTTCCTTGTCCTGAATCTTTGC-CTTGACATTATCAATGGTGTCAGAGCTCTCCAC 11039264 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || || ||||||||||| || ||||| || ||||| Sbjct 11039263 CTCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTGACAAAGATCTGCAT 11039216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362002368382401