Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=68435666 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||| | |||||||||||||| |||||||||||||| | || | ||||||| Sbjct 29766305 CACCAGGTGGAGGGTAGACTCCTTTTGGATATTGTAATCCGCGAGAGTCCTCCCGTCCTC 29766364 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 ||| || || || || | || || |||||||| ||| || | ||||| || || Sbjct 29766365 CAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTATCCTG 29766424 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAG-GCTCCGTTTCGACGGTAATGGTTT 19010 || ||| || || | | | | ||| || | || |||| |||| ||| || || | Sbjct 29766425 GATCTTCGCCTTCACGTTGTCAATAGTGTC-CGAGCTCTCCACCTCGAGGGTGATCGTCT 29766483 Query 19011 TACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||| || | ||| || || || |||||||| Sbjct 29766484 TACCCGTGAGAGTCTTCACGAAGATTTGCAT 29766514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414370387551034