Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 102 2e-16 seq3 102 2e-16 >seq7 Length=43454766 Score = 102 bits (112), Expect = 2e-16 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| || | |||||| | ||| | |||||| | || | Sbjct 13983210 ATGAAAGATGATAGTATTGAGGGAATATATGACACTTTGAAGGAATGTGCTGTCATAAGC 13983269 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740 ||| ||| || ||||||||||| || | || ||| | |||| ||||| |||||| || Sbjct 13983270 AAGTCTGCTGGAGGAATTGGTGTTTCAGTTCATAATATACGTGCCACAG-GCAGTTATAT 13983328 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| ||| || ||||| | ||||| ||||| || |||||| | |||| Sbjct 13983329 TCGTGGGACAAATGGAACTTCTAATGGCATTGTTCCAATGCTGCGGGTGTTTAATGATAC 13983388 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| | || || || || || ||||| ||| | |||||| Sbjct 13983389 TGCTCGTTATGTTGATCAAGGGGGAGGCAAGAG-AAAGGG 13983427 >seq3 Length=60060032 Score = 102 bits (112), Expect = 2e-16 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| |||| |||||| || ||| | |||||| | || | Sbjct 21218089 ATGAAAGATGATAGTATTGAGGGAATCTATGACACTCTGAAGGAATGTGCTATCATAAGC 21218148 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740 ||| |||||| ||||||||||| || | || ||| | || | ||||| ||||| || Sbjct 21218149 AAGTCTGCAGGAGGAATTGGTGTTTCAGTTCATAATATACGCGCCACAG-GTAGTTATAT 21218207 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| ||| || ||||| | || || ||||| || |||||| | |||| Sbjct 21218208 TCGTGGGACAAATGGAACTTCAAATGGCATTGTGCCGATGCTGCGGGTGTTTAATGATAC 21218267 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| | || || || || || ||||| ||| | |||||| Sbjct 21218268 TGCTCGTTATGTTGATCAAGGGGGAGGGAAGAG-AAAGGG 21218306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302684612627702