Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 seq389 84.2 2e-11 >seq12 Length=28800575 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || ||||| ||||| ||||| ||| |||| ||| | Sbjct 14035336 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTAGAGAGCTCT 14035395 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| ||||| ||||| ||||| || ||| |||| ||||| Sbjct 14035396 GACACCATTG-ACAATGTAAAGGCTAAAATCCAGGATAAGGAGGGCATCCCACCAGATCA 14035454 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| || ||||| | || |||| || |||| || || || Sbjct 14035455 GCAGCGGCTTATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACGCTGGCAGACTACAA 14035514 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||| || |||||| | ||| |||| Sbjct 14035515 CATTCAAAAGGAATCTACTCTTCATTTGGT 14035544 >seq389 Length=334988 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||||| |||||| | |||| || || ||||| || ||||||| | |||| |||| ||| Sbjct 298401 GATCAACAAAGATTGATTTTCGCTGGAAAACAGTTGGAAGATGGCCGAACCTTGGCTGAT 298460 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 || ||||||||||||||||| || | ||| |||| || || Sbjct 298461 TACAACATTCAAAAAGAGTCAACATTGCATCTGGTTTTAAG 298501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425136328583320