Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq40061 639 2e-178 seq14 201 1e-46 seq1 185 1e-41 seq1239 136 4e-27 seq155 93.3 5e-14 seq4 93.3 5e-14 >seq40061 Length=156973 Score = 639 bits (708), Expect = 2e-178 Identities = 742/993 (75%), Gaps = 8/993 (1%) Strand=Plus/Minus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 ||||||| | ||| | ||| || | ||||||||||| |||| ||||| || | Sbjct 1138 CTTCTGCAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTT 1079 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| ||||| |||| ||| | || || | Sbjct 1078 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTCATTATCGCCTTCATTGCTGCTC 1020 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || ||||| || || | || |||||| | ||||| |||| Sbjct 1019 CTCCAGTAGATATTGATGGTATTCGTGAACCAGTTTCTGGTTCTCTACTTTATGGAAACA 960 Query 166232 ACATCATCTCTGGTGCTGTTGTCCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCC 166289 | || ||||||||||| || | || || || || || || ||| | || || ||||| Sbjct 959 ATATTATCTCTGGTGCCATTATTCCGACTTCTGCA--GCTATCGGTTTGCATTTTTATCC 902 Query 166290 CATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGT 166349 || |||||||| ||||| ||||||| ||| | || || || ||||||| |||| | Sbjct 901 GATATGGGAAGCGGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAAT 842 Query 166350 AGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTA 166409 || | |||||| | | || | | |||||||||||||| |||||| | || Sbjct 841 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTT 782 Query 166410 CCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATC 166469 |||||| |||||||||||||||||| || ||||| || || ||||||||||| || | Sbjct 781 CCGCCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 722 Query 166470 CGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGG 166529 || || ||| || |||| ||| | |||||||| ||||||||| | ||||| | || Sbjct 721 TGCTGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 662 Query 166530 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCA 166589 || ||| || ||||||| |||| |||| ||||| || || ||||||||||| ||||| Sbjct 661 AATATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAACACAACATCCTTATGCA 602 Query 166590 CCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCA 166649 || || || ||| |||||||||| ||||||||||| || || || ||| || ||||| Sbjct 601 TCCATTTCACATGTTGGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 542 Query 166650 CGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACT 166708 || | || || || | | | | || | || |||||||||| || ||| || Sbjct 541 TGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATG 483 Query 166709 ATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACT 166768 ||||||| || |||||||| ||||| || || || ||||| |||||||||||||| | Sbjct 482 CGGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATT 423 Query 166769 TCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCC 166828 | || || ||||||||||||| ||| |||||||| ||||| || | || |||||| Sbjct 422 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACATTTCTTCT 363 Query 166829 TCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCAT 166888 | || || |||||||| || ||||||||||| |||||| | ||| |||| || ||||| | Sbjct 362 TGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTT 303 Query 166889 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCA 166948 ||||||| || |||||||| |||||||| || | | || ||||||||||||| ||| Sbjct 302 TCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTTATCA 243 Query 166949 ACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTA 167008 |||||||||| ||| || |||| |||||| || ||||||||||||||||| || |||| Sbjct 242 ACACTTGGGCTGATATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTA 183 Query 167009 ATGCTCACAACTTCCCTCTGGATCTTGCTGCTG 167041 ||||||||||||||||||| || || ||||||| Sbjct 182 ATGCTCACAACTTCCCTCTAGACCTAGCTGCTG 150 Score = 538 bits (596), Expect = 4e-148 Identities = 734/1018 (72%), Gaps = 10/1018 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||| ||| | | ||||| || || ||||| ||||||||||| Sbjct 33076 TTTGATATTATGGATGATTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCTGGC 33135 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||||||| | || | || || ||| |||| || || || ||| Sbjct 33136 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGTACAACTTTT 33195 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || ||||| |||| | ||| ||| ||| ||||| Sbjct 33196 GTAACTTCATGGTATACCCATGGATTGGCC---AGTTCCTATTTGGAAGGTTGC-AATTT 33251 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTT-CTACTTT 167534 | || || ||||| || |||||||| | | | | ||||| ||| || ||||| | Sbjct 33252 CTTGACCGCTGCAGTTTCCACTCCTGCGAATAGTTTAGCACATTC-CTTGTTGCTACTAT 33310 Query 167535 GGGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTT 167594 |||| |||||| | || |||||||| | | ||||| || | || || || ||| ||| Sbjct 33311 GGGGCCCTGAGGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTT 33370 Query 167595 TTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAA 167654 |||| || ||||| || | || | || ||||| |||||| | || ||||| || | Sbjct 33371 TTGTTGCTCTCCATGGTGTTTTCGGACTAATAGGTTTTATGTTACGTCAATTCGAACTTG 33430 Query 167655 GTAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCT 167714 | || || | || ||||| ||||| || || || |||| ||| |||||||| | Sbjct 33431 CTCGATCTGTGCAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTT 33490 Query 167715 TTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGT 167774 |||| ||||| || || || ||||| || || || || ||||||||||||| || | Sbjct 33491 TTGTTTCTGTATTCCTGATTTATCCACTGGGTCAATCTGGTTGGTTCTTTGCGCCCAGTT 33550 Query 167775 TTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGC 167834 |||| || ||||| |||||| ||||| | || ||| | || || || ||||| |||||| Sbjct 33551 TTGGCGTAGCAGCTATATTTCGATTCATCCTCTTCTTCCAAGGGTTTCATAATTGGACGT 33610 Query 167835 TCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAA 167894 | ||||| || ||||||||||||||||| || | |||||| ||| |||| | || | Sbjct 33611 TGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCTGCTCTGCTATGCGCTA 33670 Query 167895 TCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCA 167954 | ||||||| ||| ||||| |||||| | | ||||||||||| ||||| || ||| Sbjct 33671 TTCATGGTGCTACCGTAGAAAATACTTTATTCGAAGATGGTGACGGTGCAAATACATTCC 33730 Query 167955 AAGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCT 168014 || ||| | | ||||| | || || |||||||| ||||||||||||||||| || | Sbjct 33731 GTGCTTTTAACCCAACTCAAGCCGAAGAGACTTATTCAATGGTCACTGCTAACCGCTTTT 33790 Query 168015 GGTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTT 168074 |||| ||||| ||||| ||||||| |||||| |||||||| || ||||||||||| | Sbjct 33791 GGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 33850 Query 168075 TCGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATC 168134 | || || || | || | |||| ||| || |||| | |||| || || || || | Sbjct 33851 TTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGCCTGGCTCTGAACC 33910 Query 168135 TTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAA 168194 | ||||| |||||||| || || || ||| | | ||||| || ||||| || ||||| | Sbjct 33911 TCCGTGCCTATGACTTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 33970 Query 168195 CTTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAG 168254 ||||||| || ||||| |||||| | || ||||| | ||||| |||||||| | | Sbjct 33971 CTTTCTACACCAAAAATATCCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAGG 34030 Query 168255 ACCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 | || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 34031 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34088 >seq14 Length=24379743 Score = 201 bits (222), Expect = 1e-46 Identities = 258/356 (72%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 167684 GCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTATCCTCTC 167743 || ||||| || |||| ||| |||||||| ||||| ||| | || || || ||||| | Sbjct 16929123 GCAATTGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTATATTCCTGATTTATCCATTG 16929182 Query 167744 GGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTA 167803 || | || ||||||||||||| || |||||||| ||| | |||||| |||| | Sbjct 16929183 GGTCGATCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAACTATATTTCTATTCATC 16929242 Query 167804 CTATTCCTACAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCT 167863 || || | || | || |||| |||||| | ||||| || |||||||||||||||||| Sbjct 16929243 CTTTTTTTCCAAAGGTTTTATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCT 16929302 Query 167864 GGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTG 167923 || | |||||| ||| |||| | || || ||||||| ||| ||||| |||| | | Sbjct 16929303 GGAGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATATTTTA 16929362 Query 167924 TATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAA 167983 | ||||||||||| ||||| || ||| | || ||| | | ||||| | || || Sbjct 16929363 TTCGAAGATGGTGACGGTGCAAATACATTCCATGCTTTTAACCCAACTCAAGCTGAAGAG 16929422 Query 167984 ACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTT 168039 |||||| ||||||||| || || || ||||| ||||| |||| ||||||| Sbjct 16929423 ACTTATGTAATGGTCACTACTCACTACTTTTGGTCCCAAATCTTTGAGGTTGCTTT 16929478 >seq1 Length=68435666 Score = 185 bits (204), Expect = 1e-41 Identities = 209/279 (75%), Gaps = 1/279 (0%) Strand=Plus/Plus Query 166763 GTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACT 166822 |||| || || || |||||||| |||| || |||||||| |||| | | || | Sbjct 3686462 GTTATTTTGGCCGATTGATCTTCTAATATACTAGTTTCAACAATTCTCATTTCTTACATT 3686521 Query 166823 TCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCA 166882 ||||| | || | |||||||| || |||||||||| |||||| | || |||| || | Sbjct 3686522 TCTTCTTGGCTGTTTGGCCTGTAGTAAGTATCTGGTTCACTGCTTTAAGTATTAGTACTA 3686581 Query 166883 TGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTG 166942 || | || ||||| || | |||||| |||||||| || | | || ||||| || ||| Sbjct 3686582 TGACTTTTAACCTAAATGATTTCAA-TTCAACCAATCTGTAGTTGACCGTCAGAGTTGTG 3686640 Query 166943 TGCTCAACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACG 167002 | |||| |||||| | ||| || |||| | ||| ||| ||||||||||||||||| | Sbjct 3686641 TTATCAATACTTGGACTGATATCATCAATTGCGCTAATCTTGGTATGGAAGTAATGCATG 3686700 Query 167003 AGCGTAATGCTCACAACTTCCCTCTGGATCTTGCTGCTG 167041 | |||||||||||||||||| |||| || || ||||||| Sbjct 3686701 AACGTAATGCTCACAACTTCTCTCTAGACCTAGCTGCTG 3686739 Score = 134 bits (148), Expect = 2e-26 Identities = 241/351 (69%), Gaps = 1/351 (0%) Strand=Plus/Plus Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740 || |||||| ||| ||||||| || | ||||||| || |||||| ||| || || Sbjct 30150012 GAAACCACTAAAAATGAGTCTACTAATGAAGGTTACAGATTCAGTCAAGTAGACGAAACT 30150071 Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800 | || || || | ||| ||||||| || || | | |||| | ||| ||| ||| Sbjct 30150072 CATAATATTGTAGGTGCCCATGGTTTATTTGGCAGATTTATCTCACGATATGCTAGTTTC 30150131 Query 166801 AACAACTCTCGCTCGCTG-CACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 166859 ||||| ||| | || | || || || | || || |||| || |||||||||| ||| Sbjct 30150132 AACAATTCTTGTTCCTTAACATTTATTTTTGGCTGCTTGGCTTGCAGTCGGTATCTAGTT 30150191 Query 166860 TACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 166919 ||||| | || | || || ||| | || ||||| || |||||||| | |||||| | Sbjct 30150192 ACCTGCTTTACGTATCAGTACTATGACTTTTAACCTAAATGGTTTCAATTCCAACCAAAC 30150251 Query 166920 CATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGCTGG 166979 | | || ||||||| ||| | | || | | | ||| || |||| | || | Sbjct 30150252 TAATGTAGACAATCAGGGTTATGTTATTACCATCTAGACTGATATCATCAATCATGGTAA 30150311 Query 166980 TCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGA 167030 | | ||||||||||||| | || |||||||||||||||||||||| || Sbjct 30150312 GTTTGATATGGAAGTAATGTATGAATGTAATGCTCACAACTTCCCTCTAGA 30150362 >seq1239 Length=80461 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 167677 TTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTA 167736 ||| ||||| || || || |||| ||| |||||| | ||||| || || || |||| || Sbjct 69230 TTATAATGCAATCGCATTCTCTGTTCCAATTGCTATTTTTGTTTCCGTATTCTTCATTTA 69289 Query 167737 TCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAG 167796 ||| || || || || ||||||||||||||||| ||||||||||| |||||| | Sbjct 69290 TCCACTGGGTCAATCTAGTTGGTTCTTTGCACC-----CAGGTGTTGCAGCTATATTTTG 69344 Query 167797 ATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGG 167856 |||| | || ||| | || || || ||||| |||| | | ||||| || ||| ||| ||| Sbjct 69345 ATTCATCCTCTTCTTCCAAGGGTTTCATAATTGGATGTTGAACCCATTTCATTTGACGGG 69404 Query 167857 AGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTA 167906 |||||| || | |||| ||| |||| | | || ||||||| || Sbjct 69405 AGTTGCCGGAGTATTAGGTACTGCTCTGCTATGCACTATTCATGGTGCTA 69454 >seq155 Length=683644 Score = 93.3 bits (102), Expect = 5e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 168138 GTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTT 168197 |||| ||||||| | | ||| ||| || | | | ||| |||| |||||||| |||| Sbjct 3650 GTGCCAATGACTTCATTTTTCAAGAAATTTGTGTAATAGAAGATCTTGAGTTTGAGACTT 3709 Query 168198 TCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACC 168257 ||||||| ||||| ||| || | |||||||| | ||||| ||||||| | ||| | Sbjct 3710 TCTATACCAAAAATATCTTCTTAAATGAAGGTATTCGTGCTTGGATGGTGGCTTCAGAGC 3769 Query 168258 AACCACATGAAAACTTTGTATTCC 168281 |||| |||||||| || |||||| Sbjct 3770 AACCTCATGAAAATCTTATATTCC 3793 >seq4 Length=57251647 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 167910 TAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACGA 167969 |||| |||||| | | ||||||||||| ||||| || ||| || ||| | | | Sbjct 3793180 TAGAAAATACTTTATTCGAAGATGGTGACGGTGCAAATACGTTCCGTGCTTTTAACCCAA 3793239 Query 167970 CTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTG 168029 |||| | || || |||||||| |||||||||||||||| || ||||| ||||| |||| Sbjct 3793240 CTCAAGCTGAAGAGACTTATTCAATGGTCACTGCTAACCACTTTTGGTCCCAAATCTTTG 3793299 Query 168030 GTATTGCTTTCAGCAATAA 168048 | ||||||| |||||| Sbjct 3793300 GGGTTGCTTTTTTCAATAA 3793318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566947951485600