Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 2e-11 seq12 84.2 2e-11 >seq14 Length=24379743 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||| | |||||||||||||| || ||||| || ||| | || |||| |||| Sbjct 11039331 ACCAGCAGCGTCTTATCTTTGCTGGAAAGCAACTTGAGGATGGACGCACGCTGGCAGATT 11039390 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||| ||||||||||||||||| ||||| |||| Sbjct 11039391 ACAACATTCAGAAGGAATCTACCCTTCACTTGGT 11039424 >seq12 Length=28800575 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| |||| || | || || || ||||| ||| | ||| || | | Sbjct 14035108 ATGCAGATATTTGTTAAGACCCTTACTGGAAAGACCATCACCCTAGAAGTTGAGAGCTCT 14035167 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || |||| |||||| || || ||||| | ||| | |||| Sbjct 14035168 GATACAATTGACAATGTTAAAGCAAAAATCCAAGACAAGGAGGGAATTCCTCCAGACCAG 14035227 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || |||||||||||||| || || || ||| || |||| ||||| || Sbjct 14035228 CAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACATTGGCTGATTATAAC 14035287 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||||||||||||| || || || |||| Sbjct 14035288 ATTCAGAAGGAATCCACCCTCCACTTGGT 14035316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357949947916594