Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 4e-13 >seq14 Length=24379743 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || |||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 11039443 ACCACCCCTCAGCCGCAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCTGC 11039384 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || | || || | |||||| || ||||| || || |||||||| || Sbjct 11039383 CAGCGTGCGTCCATCCTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTC 11039330 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/236 (68%), Gaps = 18/236 (8%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || || || ||||| || | || |||||| || ||||| || |||||| Sbjct 11038986 CCCCCCCTTAGGCGGAGAACCAGGTGCAAGGTCGACTCCTTTTGGATGTTATAGTCTGCC 11038927 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || | || ||||| ||||| || ||||| ||||||||||||||||| || Sbjct 11038926 AAGGTGCGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 11038867 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC---G 34077 | | |||||||||| | | | || |||| ||||| ||||| | | || | Sbjct 11038866 ATCCCCTCTTTGTCC-TGAATCTTAGCTT--------TCACATTATCAATGGTGTCTGAG 11038816 Query 34078 CATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || ||| || ||||| || || || || || ||||||||||| ||||| Sbjct 11038815 CTCTCAACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 11038760 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| | || || |||| ||||| ||| ||| || || |||||||||||||| Sbjct 11039214 CCACCTCTTAATCGGAGGACCAAGTGAAGAGTGGACTCTTTTTGGATGTTGTAATCTGCT 11039155 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 ||| || | || || | ||||| || ||||||||||||||||||||||| || Sbjct 11039154 AATGTGCGACCATCCTCAAGCTGCTTCCCAGCAAATATCAGGCGCTGCTGATCAGGTGGG 11039095 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| || ||| | | | ||||||| Sbjct 11039094 ATGCCCTCCTTATCC-TGAATCTTTGCTT 11039067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396868536888922