Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq40061 513 2e-140 >seq40061 Length=156973 Score = 513 bits (568), Expect = 2e-140 Identities = 695/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||||||||| ||||||||||| Sbjct 1128 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 1069 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | || || | || ||||| || ||||| || || || Sbjct 1068 ACCTTATTGACCGCAACTTCTGTATTCATTATCGCCTTCATTGCTGCTCCTCCAGTAGAT 1009 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | ||||| || | ||||| | | ||||| ||||| || |||||| Sbjct 1008 ATTGATGGTATTCGTGAACCAGTTTCTGGTTCTCTACTTTATGGAAACAATATTATCTCT 949 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | || || ||||| || |||||||| Sbjct 948 GGTGCCATTATTCCGACTTCTGCAGCTATCGGTTTGCATTTTTATCCGATATGGGAAGCG 889 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| || | ||||||||||| || || || ||||||||| | || || | | |||||| Sbjct 888 GCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 829 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | ||| | |||||| Sbjct 828 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGCCTGGGTATG 769 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 ||||||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 768 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 709 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| |||||| || || |||||| |||| || || ||||| Sbjct 708 ATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 649 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | |||||||| || || |||||||| |||||||| ||||| || ||| Sbjct 648 TTCAACTTCATGATTGTATTCCAGGCGGAACACAACATCCTTATGCATCCATTTCACATG 589 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 || || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 588 TTGGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 529 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || || || ||||| || || || |||| |||| Sbjct 528 ACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGCGGGTTACAGATTC 469 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || || || || || ||||| || ||||| || | ||| Sbjct 468 GGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 409 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | || |||||| | ||| | | ||| Sbjct 408 TTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACATTTCTTCTTGGCTGCTTGGCCT 349 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| ||| | | |||||| | || ||||| || ||||| ||||| Sbjct 348 GTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGT 289 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || || | ||| || | || ||||| || Sbjct 288 TTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTTATCAACACTTGGGCTGAT 229 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 | | || | || ||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct 228 ATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCACAACTTC 169 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 168 CCTCTAGAC 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582556131578400