Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13]
40,061 sequences; 1,535,178,229 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq6 116 2e-21
seq5 116 2e-21
seq14 109 4e-19
seq12 107 1e-18
seq17 102 5e-17
seq2 102 5e-17
seq19 98.7 6e-16
seq1 98.7 6e-16
seq29159 96.9 2e-15
seq71 95.1 8e-15
seq10 91.5 1e-13
seq160 84.2 1e-11
seq389 82.4 5e-11
>seq6
Length=44357769
Score = 116 bits (128), Expect = 2e-21
Identities = 146/195 (75%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| |||||||| |||||||| | |||| | | | || || ||||| || ||||| |||
Sbjct 21860559 TCCTTCTGAATATTATAGTCGGCAAGGGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAT 21860618
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| |||| | ||||||||| || |||||| ||||| ||
Sbjct 21860619 ATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTATCCTGGATCTTCGCCTTGAC--AT 21860676
Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
|||| || | ||| || ||| || |||| ||| || || ||||||||||| |||||
Sbjct 21860677 --TATCAATGGTATCCGAGCTCTCCACCTCGAGGGTGATCGTCTTTCCCGTGAGGGTCTT 21860734
Query 34967 CACAAAGATCTGCAT 34981
|||||||||||||||
Sbjct 21860735 CACAAAGATCTGCAT 21860749
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
||||| || |||||||| || | ||| | || | || || || || |||||||| ||
Sbjct 21860787 TCTTTTTGGATGTTATAATCGGCGAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAG 21860846
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | || ||||| || |||||| ||||||
Sbjct 21860847 ATCAGACGCTGCTGGTCCGGCGGAATACCTTCCTTATCTTGAATCTTGGCCTTGACGTTG 21860906
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | ||| || || | ||| ||||| || || ||||| ||||| ||
Sbjct 21860907 TCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 21860966
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 21860967 AAGATCTGCAT 21860977
>seq5
Length=51955539
Score = 116 bits (128), Expect = 2e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||||||||| | ||| | || | || || |||||||||||||| ||
Sbjct 10328004 TCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAG 10327945
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||| ||||| ||||| ||||||
Sbjct 10327944 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTG 10327885
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || || ||| || |||| ||| ||||| || ||||| |||||||||||
Sbjct 10327884 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTCACG 10327825
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 10327824 AAGATCTGCATCTT 10327811
>seq14
Length=24379743
Score = 109 bits (120), Expect = 4e-19
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| || || |||||||||| || ||| ||||||||||| || || |
Sbjct 11039442 CCACCCCTCAGCCGCAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCTGCC 11039383
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | ||| |||| || || || ||||| ||||| || || || ||||||||| | ||
Sbjct 11039382 AGCGTGCGTCCATCCTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGG 11039323
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930
| || |||||||| |||||| ||||| || |||| || ||| | |||
Sbjct 11039322 ATTCCTTCCTTGTCCTGAATCTTTGCCTTGAC--AT--TATCAATGGTGTCAGAGCTCTC 11039267
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || | || || || || || || |||||||| ||||||||||||||
Sbjct 11039266 CACCTCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTGACAAAGATCTGCAT 11039216
Score = 100 bits (110), Expect = 2e-16
Identities = 144/198 (73%), Gaps = 10/198 (5%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||||||||| ||||| | ||| | || |||| |||||||| || ||||||||
Sbjct 11039635 TTCTTTCTGAATGTTGTAGTCTGCAAGAGTGCGACCATCCTCCAGCTGCTTCCCGGCAAA 11039576
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGG 34908
|| || || ||||| || | || | ||||||||||| |||||| ||| || ||
Sbjct 11039575 GATGAGGCGCTGCTGATCAGGGGGTATGCCCTCCTTGTCCTGAATCTT-TGTCTTCAC-- 11039519
Query 34909 ATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
|| |||| || ||| ||| || || | ||| || || || || || | ||||
Sbjct 11039518 AT--TATCAATGGTGTCAGAACTCTCCACCTCCAAGGTAATTGTCTTCCCTGTTAAAGTC 11039461
Query 34965 TTCACAAAGATCTGCATA 34982
|| |||||||||||||||
Sbjct 11039460 TTAACAAAGATCTGCATA 11039443
Score = 98.7 bits (108), Expect = 6e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| || || ||||| | ||| | || |||| || ||||| |||||||| ||
Sbjct 6055535 TCCTTCTGGATATTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 6055476
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| ||||| ||||||
Sbjct 6055475 ATAAGGCGCTGCTGATCCGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 6055416
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || || ||| || || | ||| ||||| || || ||||| ||||| |||
Sbjct 6055415 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 6055356
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 6055355 AAGATCTGCATCTT 6055342
Score = 89.7 bits (98), Expect = 3e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| || || ||||| | ||| | || |||| || ||||| || || || ||
Sbjct 6042236 TCCTTCTGGATATTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAG 6042177
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| ||||| ||||||
Sbjct 6042176 ATAAGGCGCTGCTGATCCGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 6042117
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || ||| || |||| ||| ||||| || || ||||| ||||| |||
Sbjct 6042116 TCGATTGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACA 6042057
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 6042056 AAGATCTGCATCTT 6042043
Score = 84.2 bits (92), Expect = 1e-11
Identities = 137/195 (70%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || || ||||||||||| | | | | || |||| |||| ||| || || |||||
Sbjct 11038950 TCCTTTTGGATGTTATAGTCTGCCAAGGTGCGACCATCCTCCAACTGCTTCCCAGCAAAG 11038891
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | |||||| ||||| |||||| ||| || ||
Sbjct 11038890 ATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTGTCCTGAATCTTAGCTTTCAC--AT 11038833
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
|||| || || | |||||| || | ||| || || || || || || |||||
Sbjct 11038832 --TATCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTCTT 11038775
Query 34967 CACAAAGATCTGCAT 34981
|||||||||||||||
Sbjct 11038774 CACAAAGATCTGCAT 11038760
>seq12
Length=28800575
Score = 107 bits (118), Expect = 1e-18
Identities = 166/233 (71%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812
|| ||||| | || || || | ||| | ||| |||||||| ||||||||||| |
Sbjct 14035106 CCGCCCCTAAGCCGCAGGACAAGGTGGAGTGTTGACTCTTTCTGGATGTTATAGTCAGCC 14035047
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || |||||||| || ||||| || || | |||||||| |||
Sbjct 14035046 AAAG--TGCGGCCATCCTCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGCG 14034989
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCC 34928
| | ||||||||||| |||||| || || || |||| || ||| | |
Sbjct 14034988 GAATGCCCTCCTTGTCCTGAATCTTAGCCTTCAC--AT--TATCAATTGTGTCAGAGCTC 14034933
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || | ||| ||||| || || || || ||||||||||||||||||||
Sbjct 14034932 TCAACTTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 14034880
Score = 102 bits (112), Expect = 5e-17
Identities = 154/212 (73%), Gaps = 9/212 (4%)
Strand=Plus/Minus
Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
|||| |||| ||| ||||||||| ||||| ||||| | ||| | ||| |||| || |
Sbjct 14079348 CAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGCGAGGGTACGTCCATCCTCAA 14079289
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
|||| || || ||||| || || | |||||||| | || | ||| |||||||| |
Sbjct 14079288 GCTGCTTACCAGCAAAAATGAGCCTCTGCTGGTCAGGAGGGATCCCTTCCTTGTCCTGGA 14079229
Query 34894 TCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTT 34949
|||| ||||| || ||||||| | ||| || ||| || || | || |||||
Sbjct 14079228 TCTTGGCCTTGAC--AT--TATCGATGGTGTCCGAGCTCTCCACTTCCAAAGTGATGGTC 14079173
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || ||||| ||||||||||| ||||||||
Sbjct 14079172 TTCCCAGTGAGGGTCTTCACAAAAATCTGCAT 14079141
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| ||| |||||||||||||| || | | | || |||| ||
Sbjct 14035316 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAATGTACGGCCATCCTCA 14035257
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || | ||||||||| | || | |||||||||||
Sbjct 14035256 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCTTGG 14035197
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || ||| || | || | ||| | |||||| || | ||| ||||| |||
Sbjct 14035196 ATTTTTGCTTTAACATTGTCAATTGTATCAGAGCTCTCAACTTCTAGGGTGATGGTCTTT 14035137
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || ||||| ||||| |||||||||
Sbjct 14035136 CCAGTAAGGGTCTTAACAAATATCTGCATA 14035107
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||||||| ||||| | || | || |||| || |||||||| ||||| ||
Sbjct 14032886 TCTTTCTGAATGTTGTAGTCAGCCAGTGTGCGACCATCCTCAAGCTGTTTGCCGGCGAAA 14032827
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | || |||||| | || | ||||||||||| ||||| || || ||
Sbjct 14032826 ATAAGCCTCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCAC--AT 14032769
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
||||||| ||| | ||||| || | || ||||| || || || ||||||||
Sbjct 14032768 --TATCGATTGTATCAGAGCTTTCAACTTCAAGAGTGATGGTCTTGCCAGTCAGAGTCTT 14032711
Query 34967 CACAAAGATCTGCAT 34981
||||||||||||||
Sbjct 14032710 AACAAAGATCTGCAT 14032696
Score = 93.3 bits (102), Expect = 3e-14
Identities = 165/233 (71%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812
|| ||||| | || ||| || | ||| | ||| |||||||| ||||| ||||| |
Sbjct 14045281 CCACCCCTGAGCCGCAAGACAAGGTGGAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCC 14045222
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || || ||||| || ||||| || || | |||||||| | |
Sbjct 14045221 AAAG--TGCGGCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGG 14045164
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-C 34928
| | |||||||| || ||||| || || || |||| || | ||| || |
Sbjct 14045163 GGATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--AT--TATCAATGGTGTCCGAGCTC 14045108
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || | ||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 14045107 TCAACTTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACAAAGATCTGCAT 14045055
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/233 (70%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812
|| ||||| | || | ||| | ||| | ||| |||||||| || || ||||| |
Sbjct 14045509 CCACCCCTGAGCCGTAGAACAAGGTGGAGTGTTGACTCTTTCTGGATATTGTAGTCAGCC 14045450
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| |||| |||| || || ||||| || ||||| || || | |||||||| | |
Sbjct 14045449 AAAG--TTCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATGAGCCTCTGCTGGTCAGGGG 14045392
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCC 34928
| | ||||||||||| |||||| || || || |||| || ||| | |
Sbjct 14045391 GGATGCCCTCCTTGTCCTGAATCTTAGCCTTCAC--AT--TATCAATTGTGTCAGAGCTC 14045336
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || | ||| ||||| || || || || ||||||||||||||||||||
Sbjct 14045335 TCAACTTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 14045283
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/197 (73%), Gaps = 12/197 (6%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848
|| ||||| || |||||||||| |||| | || |||| || ||||| ||||| ||||
Sbjct 14035754 TCCTTCTGGATATTATAGTCCGCCAAAG--TACGCCCATCCTCAAGCTGCTTTCCAGCAA 14035697
Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908
| || |||| |||||| || | || | || ||||| || ||||| |||||
Sbjct 14035696 AAATAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTGAC-- 14035639
Query 34909 ATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
|| ||||||| | ||| || ||| || || | || ||||| || || ||||| |||
Sbjct 14035638 AT--TATCGATGGTGTCCGAGCTCTCCACTTCTAGAGTGATGGTCTTCCCAGTGAGGGTC 14035581
Query 34965 TTCACAAAGATCTGCAT 34981
|||||||||||||||||
Sbjct 14035580 TTCACAAAGATCTGCAT 14035564
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/197 (72%), Gaps = 12/197 (6%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848
||||| || ||||| ||||| | |||| | || |||| ||||| |||||||| ||||
Sbjct 14045701 TCTTTTTGGATGTTGTAGTCGGCCAAAG--TGCGGCCATCCTCCAGTTGTTTTCCAGCAA 14045644
Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908
| || || | ||||| ||| | || | ||||||||||| |||||| || ||
Sbjct 14045643 AGATGAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTCAC-- 14045586
Query 34909 ATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
|| |||| || ||| | |||||| || | ||| || || || || || || |||
Sbjct 14045585 AT--TATCAATTGTGTCAGAGCTCTCAACTTCCAGGGTGATCGTCTTGCCAGTAAGGGTC 14045528
Query 34965 TTCACAAAGATCTGCAT 34981
|||||||||||||||||
Sbjct 14045527 TTCACAAAGATCTGCAT 14045511
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||| |||| || ||| || |||||||| ||||| | | | || |||| |||
Sbjct 14079121 ACCAAATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCTGCCAACGTGCGCCCATCCTCC 14079062
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| |||||| || ||||| || || || ||||| || | || | |||||||| ||
Sbjct 14079061 AACTGTTTACCAGCAAAGATGAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGG 14079002
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || || | || | ||| | ||| || || | ||| ||||| |||
Sbjct 14079001 ATCTTAGCCTTTACATTGTCAATGGTGTCAGAGCTCTCTACCTCAAGGGTGATGGTCTTT 14078942
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| ||||||||||||||||||||
Sbjct 14078941 CCAGTGAGGGTCTTCACAAAGATCTGCAT 14078913
>seq17
Length=6372654
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| | ||| | || |||| || ||||| |||||||| ||
Sbjct 622376 TCCTTCTGAATGTTGTAGTCGGCGAGGGTCCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 622317
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | ||||||||||| ||||| ||||||
Sbjct 622316 ATGAGGCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 622257
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || |||| ||| || || || |||||||| || |||||
Sbjct 622256 TCGATTGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGGTTTTCACG 622197
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 622196 AAGATCTGCAT 622186
>seq2
Length=65558141
Score = 102 bits (112), Expect = 5e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || || | ||| | || | || || ||||| |||||||| ||
Sbjct 62822536 TCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 62822595
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | ||||||||||| ||||| ||||||
Sbjct 62822596 ATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 62822655
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || ||| || |||| ||| || || || |||||||| ||||||||
Sbjct 62822656 TCGATGGTGTCGGAGGACTCTACCTCGAGGGTAATAGTCTTCCCCGTGAGGGTCTTCACG 62822715
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 62822716 AAGATCTGCATGTT 62822729
>seq19
Length=4066982
Score = 98.7 bits (108), Expect = 6e-16
Identities = 108/143 (76%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
||||| |||| ||||| | ||||||||||| ||| | || |||||||||||||||
Sbjct 710422 ATCATAGTTCCACCCCTGAGCCTCAAAACCAGGTGGAGAGTTGATTCTTTCTGAATGTTG 710481
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
||||| | | | |||| |||| |||| ||| || || ||||||||||| | |||||
Sbjct 710482 TAGTCAGCTAAGGTTCGACCATCCTCCAACTGCTTCCCTGCAAATATTAGCCTCTGCTGA 710541
Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888
||| | || | |||||||| ||
Sbjct 710542 TCTGGAGGTATACCCTCCTTATC 710564
>seq1
Length=68435666
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||| | | | |||||||| | || || ||||| || |||||||| |
Sbjct 29766516 CCTCCCCTAAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATATTATAGTCGGCG 29766575
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | | | || || |||||||| ||||| || || || | |||||||| | ||
Sbjct 29766576 AGGGTCCTGCCGTCTTCAAGCTGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 29766635
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| |||||| |||||| | |||| || || ||| ||
Sbjct 29766636 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 29766695
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| |||||||| || ||||| ||||| || |||||||||||
Sbjct 29766696 TCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 29766742
>seq29159
Length=2312
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812
|| ||||| | || || ||| | ||| | ||| |||||||| || || ||||| |
Sbjct 2216 CCACCCCTGAGCCGCAGAACAAGGTGGAGTGTTGACTCTTTCTGGATATTGTAGTCAGCC 2157
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || || ||||| || ||||| || || | |||||||| | |
Sbjct 2156 AAAG--TGCGACCATCCTCAAGTTGTTTGCCAGCAAAAATGAGCCTCTGCTGGTCGGGAG 2099
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | ||||||||||| |||||| || || | |||| ||| | |||||
Sbjct 2098 GGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTATCAGAGCTCTCAA 2039
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| ||||| || || || || ||||||||||||||||||||
Sbjct 2038 CTTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 1990
Score = 93.3 bits (102), Expect = 3e-14
Identities = 165/233 (71%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812
|| ||||| | || ||| || | ||| | ||| |||||||| ||||| ||||| |
Sbjct 1988 CCACCCCTGAGCCGCAAGACAAGGTGGAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCC 1929
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || || ||||| || ||||| || || | |||||||| | |
Sbjct 1928 AAAG--TGCGGCCATCCTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGAG 1871
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-C 34928
| | |||||||| || ||||| || || || |||| || | ||| || |
Sbjct 1870 GGATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--AT--TATCAATGGTGTCCGAGCTC 1815
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || | ||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 1814 TCAACTTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACAAAGATCTGCAT 1762
>seq71
Length=983643
Score = 95.1 bits (104), Expect = 8e-15
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804
|||||| |||| ||||| | ||||||||||| ||||| || ||||| ||||| ||
Sbjct 265303 AATCATCGTTCCACCCCTAAGCCTCAAAACCAGGTGAAGAGTTGACTCTTTTTGAATATT 265244
Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864
|| || | ||| |||| |||| |||| |||||| || ||||| || | | ||||||
Sbjct 265243 GTAATCAGCTAGGGTTCGACCATCTTCCAACTGTTTCCCAGCAAAAATCAACCTTTGCTG 265184
Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888
||| | || | ||||||||||||
Sbjct 265183 ATCTGGGGGTATCCCCTCCTTGTC 265160
>seq10
Length=31890735
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| || || || || |||||||| |||| ||| | || |||| |||
Sbjct 15231380 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAATCCGCCAGGGTGCGGCCATCCTCC 15231439
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| || ||||| ||||| || | || |||||||| | || | || |||||||| |
Sbjct 15231440 AGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 15231499
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || || ||| | |||| || | ||| || || | || ||||| ||
Sbjct 15231500 ATTTTAGCCTTCACGTTGTCAATCGTGTCCGAGCTCTCGACCTCAAGAGTGATGGTCTTC 15231559
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| ||||| |||||||||||||||
Sbjct 15231560 CCAGTGAGGGTCTTGACAAAGATCTGCATA 15231589
>seq160
Length=614534
Score = 84.2 bits (92), Expect = 1e-11
Identities = 105/143 (73%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 34748 ATCATT--TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
|||||| ||| ||||| | ||| ||||||| || | ||| ||||| ||||||||
Sbjct 340277 ATCATTGTTCCACCCCTAAGCCTTAAAACCAGATGCAGTGTTGACTCTTTTTGAATGTTG 340218
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
|| || | ||| |||| |||| |||| ||| ||||| ||||| || | || ||| ||
Sbjct 340217 TAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTTCCAGCAAAAATCAATCTTTGTTGA 340158
Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888
||| | || | |||||||||||
Sbjct 340157 TCTGGGGGTATACCCTCCTTGTC 340135
>seq389
Length=334988
Score = 82.4 bits (90), Expect = 5e-11
Identities = 105/144 (73%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 34747 AATCATT--TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804
||||||| ||| ||||| | ||| ||||||| || | ||| ||||| ||||||||
Sbjct 298523 AATCATTGTTCCACCCCTAAGCCTTAAAACCAGATGCAATGTTGACTCTTTTTGAATGTT 298464
Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864
|| || | | | |||| |||| |||| ||||||||| || || || | || ||| ||
Sbjct 298463 GTAATCAGCCAAGGTTCGGCCATCTTCCAACTGTTTTCCAGCGAAAATCAATCTTTGTTG 298404
Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888
||| | || | |||||||||||
Sbjct 298403 ATCTGGGGGTATACCCTCCTTGTC 298380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324475099775208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |