Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq10 129 5e-25 seq14 125 6e-24 seq6 118 8e-22 seq1 114 1e-20 seq12 102 6e-17 seq16 89.7 4e-13 seq8 89.7 4e-13 seq17 87.8 1e-12 >seq10 Length=31890735 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| || ||||| || || ||||| || | || | | |||| ||| Sbjct 15231380 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAATCCGCCAGGGTGCGGCCATCCTCC 15231439 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| || ||||| ||||||||||| || || || ||||||||||| || || ||| Sbjct 15231440 AGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 15231499 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || | || | ||||| || | || || |||||||||| || || Sbjct 15231500 ATTTTAGCCTTCACGTTGTCAATCGTGTCCGAGCTCTCGACCTCAAGAGTGATGGTCTTC 15231559 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| |||||||| Sbjct 15231560 CCAGTGAGGGTCTTGACAAAGATCTGCAT 15231588 >seq14 Length=24379743 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||||||||| || || || |||||||| || | || | |||| || Sbjct 11039424 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTCCATCCTCA 11039365 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| || ||||| || | |||||| || || || || || ||||| || || ||| Sbjct 11039364 AGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGA 11039305 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||| || ||| | || | |||||||| | ||||| || | ||||| ||| || Sbjct 11039304 ATCTTTGCCTTGACATTATCAATGGTGTCAGAGCTCTCCACCTCCAAAGTGATCGTCTTC 11039245 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || ||||| |||||||| Sbjct 11039244 CCTGTCAGAGTCTTGACAAAGATCTGCAT 11039216 >seq6 Length=44357769 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| ||||| |||||||| || || |||||||||| || | | || || | ||| Sbjct 21860774 ATGAAGAGTAGACTCTTTTTGGATGTTATAATCGGCGAGGGTGCGACCGTCCTCAAGTTG 21860833 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| |||||| || || |||||||| ||||| ||||||||||| || Sbjct 21860834 CTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATACCTTCCTTATCTTGAATCTT 21860893 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| || | || || || | |||| || |||||||| Sbjct 21860894 GGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGT 21860953 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || || || ||||||||| Sbjct 21860954 GAGGGTCTTGACGAAGATCTGCATG 21860978 >seq1 Length=68435666 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || |||||||| || ||||| ||||||||||| |||| ||| || | || |||| |||| Sbjct 29766312 TGGAGGGTAGACTCCTTTTGGATATTGTAATCCGCGAGAGTCCTCCCGTCCTCCAGTTGC 29766371 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| | ||| || || |||||||| || || ||||| || || || Sbjct 29766372 TTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTATCCTGGATCTTC 29766431 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||| || | ||||| || || |||| ||| || || || Sbjct 29766432 GCCTTCACGTTGTCAATAGTGTCCGAGCTCTCCACCTCGAGGGTGATCGTCTTACCCGTG 29766491 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || || || || ||||| Sbjct 29766492 AGAGTCTTCACGAAGATTTGCAT 29766514 >seq12 Length=28800575 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| ||||| || || || || ||||| || | || | | |||| || Sbjct 14035316 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAATGTACGGCCATCCTCA 14035257 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | | ||| || || || ||||| || || || ||||| Sbjct 14035256 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCTTGG 14035197 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||| ||| ||| | || | || ||||| | || ||||| || |||| || || Sbjct 14035196 ATTTTTGCTTTAACATTGTCAATTGTATCAGAGCTCTCAACTTCTAGGGTGATGGTCTTT 14035137 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || |||||||||||||| Sbjct 14035136 CCAGTAAGGGTCTTAACAAATATCTGCAT 14035108 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| || || || ||||| || || ||||| || || | || | |||| || Sbjct 14032905 AACAAGATGGAGTGTCGACTCTTTCTGAATGTTGTAGTCAGCCAGTGTGCGACCATCCTC 14032846 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | || || || || || || | | |||||| || || || ||||| || || ||||| Sbjct 14032845 AAGCTGTTTGCCGGCGAAAATAAGCCTCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTG 14032786 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| | || | || ||||| |||| ||||||||||||| || || Sbjct 14032785 GATCTTGGCCTTCACATTATCGATTGTATCAGAGCTTTCAACTTCAAGAGTGATGGTCTT 14032726 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | ||| || ||||| |||||||| Sbjct 14032725 GCCAGTCAGAGTCTTAACAAAGATCTGCAT 14032696 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || ||||| || || || || || || | ||| | | |||| || | || Sbjct 14035082 TGGAGTGTTGACTCTTTCTGGATGTTATAGTCAGCCAAAGTGCGGCCATCCTCAAGCTGT 14035023 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || ||||||||||| || || || ||||| || Sbjct 14035022 TTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGAATCTTA 14034963 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||||| | || ||||| || |||| || ||||| || Sbjct 14034962 GCCTTCACATTATCAATTGTGTCAGAGCTCTCAACTTCCAGGGTGATGGTCTTGCCAGTA 14034903 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 14034902 AGGGTCTTCACAAAGATCTGCATG 14034879 >seq16 Length=21371083 Score = 89.7 bits (98), Expect = 4e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||| | || ||||| |||||||||||||| || | || | |||| || | || Sbjct 17428066 ATGAAAGCCAGGCTCTTTCTGTATATTGTAATCAGCAACGGTATGGCCATCCTCAAGCTG 17428125 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| ||| |||| | ||| | | ||||| | || ||||| || ||||| | |||||| Sbjct 17428126 CTTCCCTACAAAGA-CAAGCCTTTTTGATATAGAGGGATGCCATCCTTATCCTAAATTTT 17428184 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | || | || || || | ||||| || | ||||| ||||| ||||| Sbjct 17428185 GGCTTTAACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAAGTGATGGTTTTCCCGGT 17428244 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || ||||| |||| ||| Sbjct 17428245 AAGAGTCTTCACAAAAATCTACAT 17428268 >seq8 Length=40195399 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 101346 GCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAG 101405 |||| || || | || || ||||| ||||||||||| ||| || ||| | || | || Sbjct 13603204 GCTGCTGGTCTAGAGGGATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTATCAATAG 13603145 Query 101406 TGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCT 101465 ||||||| | ||||| || | ||||| ||| || || |||| |||||| ||||| |||| Sbjct 13603144 TGTCAGAGCTCTCCACCTCCAAAGTGATCGTATTCCCTGTTAGAGTTTTGACAAAGATCT 13603085 Query 101466 GCAT 101469 |||| Sbjct 13603084 GCAT 13603081 >seq17 Length=6372654 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| ||||||| || | | |||| || | ||| Sbjct 622388 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTCCGGCCATCCTCGAGCTGC 622329 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || || ||||| || || || || || || Sbjct 622328 TTTCCGGCGAAGATGAGGCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTG 622269 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | ||||| || || |||| || || || || Sbjct 622268 GCCTTGACGTTCTCGATTGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTG 622209 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | ||||| || || ||||||||||| Sbjct 622208 AGGGTTTTCACGAAGATCTGCATGGT 622183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396084919671777