Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq40061 504 9e-138 >seq40061 Length=156973 Score = 504 bits (558), Expect = 9e-138 Identities = 706/986 (72%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| ||||||||||| ||||| | ||||||||| ||||||||||| | ||| Sbjct 155 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 214 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | || | | ||| |||| || || | ||| | | ||||| || ||| Sbjct 215 GCACGATTGATGATATCAGCCCAAGTGTTGATAACACGACCCTGACTGTCAACTACAGAT 274 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || || || || ||||| || ||||| || | |||||| | || ||| ||| Sbjct 275 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAAC 334 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTG-AAG--ACTTCTACTGTTGTTA 8127 || | || ||| || || | | ||| | |||||| || ||| || | ||||| | Sbjct 335 CAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAATGTAAGGAACGAGAATTGTTG--A 392 Query 8128 AACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAG 8187 ||| | ||||| |||||||| |||| ||||| || ||||||||||| || |||||||| Sbjct 393 AACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAA 451 Query 8188 GTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCT 8247 || ||||| |||||||| || | ||||| || ||| || | |||||| || || Sbjct 452 GTTTCTTCCTCTTGACCGAATCTGTAACCCGCATTAGCAGATTCGTTTTCAGTGGTTTCC 511 Query 8248 CTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAAC 8307 ||||| | | ||| || || || ||||| |||||||||||||| || || || ||||| Sbjct 512 CTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 571 Query 8308 ATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAAT 8367 | ||| ||||| || ||| || || ||||||||||| ||||| || || || |||||| Sbjct 572 ACACCAGCTACACCCAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTGGAAT 631 Query 8368 ACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCC 8427 || | ||||||||| || |||||||| || |||| |||||| ||||||||||| || Sbjct 632 ACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 691 Query 8428 TGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCT 8487 ||||||| || || | ||||| || || |||||| | || ||||| |||||| Sbjct 692 TGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 751 Query 8488 ACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAA 8547 ||| ||||| || | |||||| | |||| | | ||||||| | |||||||||| Sbjct 752 ACAGCAATCCAAGGACGCATACCCAGGCGGAAACTAAGTTCCCACTCACGACCCATGTAA 811 Query 8548 GCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAAC 8607 || | |||| | |||||| | | || | || ||| ||||| || || || ||| Sbjct 812 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAAC 871 Query 8608 CACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAA 8667 |||||||| | | || |||||||| || ||||| || || || || ||||| ||| Sbjct 872 CACTCATCAACAGATGCCGCTTCCCATATCGGATAAAAATGCAAACCGATAGCTGCAGAA 931 Query 8668 GATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGT 8727 | |||| | ||||||||||| || ||||||||||| | | ||||| | ||| ||| Sbjct 932 GTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAGAGAACCAGAAACTGGT 991 Query 8728 TCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTA 8787 ||||||||||| || ||||| || || ||||||||||| || || | || || || | Sbjct 992 TCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATGAATACAGAA 1051 Query 8788 GCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTG 8847 | || | || ||| ||| ||||| | ||| || ||||| || | ||||| | ||| Sbjct 1052 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAGACGGTTT 1111 Query 8848 TTTGTACTTGTAACCCACTCGCAAAA 8873 | || || || | ||| | ||| || Sbjct 1112 TCAGTGCTGGTTATCCAGTTGCAGAA 1137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615553999204920