Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13]
40,061 sequences; 1,535,178,229 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 134 1e-26
seq10 122 8e-23
seq14 118 1e-21
seq17 104 2e-17
seq1 102 7e-17
seq6 98.7 9e-16
seq2 98.7 9e-16
seq29159 93.3 4e-14
seq5 84.2 2e-11
>seq12
Length=28800575
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || || ||||| | ||
Sbjct 14046376 ATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTAGAGAGCTCC 14046435
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | ||||| |||||||| || || || || || || || |||||
Sbjct 14046436 GACACCATTGACAATGTAAAGGCTAAGATCCAGGATAAGGAGGGCATCCCACCAGATCAG 14046495
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || ||||||||||||||| | | | || |||| || |||
Sbjct 14046496 CAGCGTCTCATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACACTGGCAGACTACAAC 14046555
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|||||||||||||| || || || |||||
Sbjct 14046556 ATTCAAAAGGAATCTACTCTTCATTTGGT 14046584
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| |||| || || || || || || || || || ||||| || | |
Sbjct 14035108 ATGCAGATATTTGTTAAGACCCTTACTGGAAAGACCATCACCCTAGAAGTTGAGAGCTCT 14035167
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || || | |||| ||||| ||||||||||| || ||||| ||||| || ||
Sbjct 14035168 GATACAATTGACAATGTTAAAGCAAAA-ATCCAAGACAAGGAGGGAATTCCTCCAGACCA 14035226
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || || ||||| |||||| | | || | ||||||||
Sbjct 14035227 GCAGAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACATTGGCTGATTATAA 14035286
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
|||||| |||||||| || || ||||||||
Sbjct 14035287 CATTCAGAAGGAATCCACCCTCCACTTGGT 14035316
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || ||||| ||||| | |
Sbjct 14035336 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTAGAGAGCTCT 14035395
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | ||||| || ||||| || || || || || || || |||||
Sbjct 14035396 GACACCATTGACAATGTAAAGGCTAAAATCCAGGATAAGGAGGGCATCCCACCAGATCAG 14035455
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | |||||||| || ||||||||||||||| | | | || |||| || |||
Sbjct 14035456 CAGCGGCTTATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACGCTGGCAGACTACAAC 14035515
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|||||||||||||| || || || |||||
Sbjct 14035516 ATTCAAAAGGAATCTACTCTTCATTTGGT 14035544
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || ||||| | |
Sbjct 14078913 ATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTAGAGAGCTCT 14078972
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | ||||| |||||||| || || || || || || || |||||
Sbjct 14078973 GACACCATTGACAATGTAAAGGCTAAGATCCAGGATAAGGAGGGCATCCCACCGGATCAG 14079032
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || |||||| |||||||| | | | || |||| || |||
Sbjct 14079033 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGGCGCACGTTGGCAGACTACAAC 14079092
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|||||||||||||| || || || |||||
Sbjct 14079093 ATTCAAAAGGAATCTACTCTTCATTTGGT 14079121
Score = 105 bits (116), Expect = 6e-18
Identities = 153/211 (73%), Gaps = 5/211 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || || || || || || || ||||| ||| | |
Sbjct 14032695 GATGCAGATCTTTGTTAAGACTCTGACTGGCAAGACCATCACTCTTGAAGTTGAAAGCTC 14032754
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 14032755 TGATACAATCGATAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 14032814
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
||| | | || || ||||| |||||||| |||||| ||| | || || | || ||
Sbjct 14032815 ACAGAGGCTTATTTTCGCCGGCAAACAGCTTGAGGATGGTCG-CACAC-TGGCTGACTAC 14032872
Query 24881 AACATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||||| || || |||||||| || ||||
Sbjct 14032873 AACATTCAGAAAGAGTCGACACTCCATCTTG 14032903
Score = 98.7 bits (108), Expect = 9e-16
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || || || || || || || || || || ||||| || | |
Sbjct 14046603 GATGCAGATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTCTGGAAGTGGAGAGCTC 14046662
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 14046663 GGACACCATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCTGATCA 14046722
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | || ||||||||||| ||||| |||||| | | | | || | || || ||
Sbjct 14046723 GCAGAGGCTTATTTTTGCCGGGAAGCAGCTTGAGGATGGGCGTACCCTGGCGGACTACAA 14046782
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
||| |||||||| || || || || ||||
Sbjct 14046783 CATCCAAAAGGAGTCCACTCTTCATCTTG 14046811
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || ||||| || | |
Sbjct 14045511 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCCTGGAAGTTGAGAGCTCT 14045570
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| || ||||| || || || || || |||||
Sbjct 14045571 GACACAATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 14045630
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || ||||| ||||||||| | | || | || || |||
Sbjct 14045631 CAGAGGCTCATCTTTGCTGGAAAACAACTGGAGGATGGCCGCACTTTGGCCGACTACAAC 14045690
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|| ||||| || |||||||| ||| | || |||||
Sbjct 14045691 ATCCAAAAAGAGTCGACACTCCACCTTGTCCTGCGA 14045726
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || ||||| || | |
Sbjct 14035563 GATGCAGATCTTTGTGAAGACCCTCACTGGGAAGACCATCACTCTAGAAGTGGAGAGCTC 14035622
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||||||||| || ||||| || ||||| |||||
Sbjct 14035623 GGACACCATCGATAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCTGATCA 14035682
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | || ||||| || || ||||| |||||| | | | || | || |||||
Sbjct 14035683 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAGGATGGGCGTACTTTGGCGGACTATAA 14035742
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || || || || ||||
Sbjct 14035743 TATCCAGAAGGAGTCCACTCTTCATCTTG 14035771
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || ||||| || | |
Sbjct 14034880 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACCATCACCCTGGAAGTTGAGAGCTCT 14034939
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 14034940 GACACAATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCGCCGGACCAG 14034999
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || |||||||| |||||| | | || | || ||||||
Sbjct 14035000 CAGAGGCTCATCTTTGCTGGCAAACAGCTTGAGGATGGCCGCACTTTGGCTGACTATAAC 14035059
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || || ||||| ||| | || ||||
Sbjct 14035060 ATCCAGAAAGAGTCAACACTCCACCTTGTCCTGCG 14035094
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || || || || || || || ||||| || | |
Sbjct 14045054 GATGCAGATCTTTGTTAAGACTCTCACTGGCAAGACCATCACCCTTGAAGTTGAGAGCTC 14045113
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || || || || || || || || ||
Sbjct 14045114 GGACACCATTGATAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 14045173
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || ||||| || |||||| | | || | || || ||
Sbjct 14045174 GCAGAGGCTCATCTTTGCTGGCAAACAACTTGAGGATGGCCGCACTTTGGCTGACTACAA 14045233
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||| || || || || ||||| ||| | || |||||
Sbjct 14045234 CATCCAGAAAGAGTCAACACTCCACCTTGTCTTGCG 14045269
>seq10
Length=31890735
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || | |
Sbjct 15231588 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACCATCACTCTTGAGGTCGAGAGCTCG 15231529
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| || || ||||| ||||| || ||||| || ||
Sbjct 15231528 GACACGATTGACAACGTGAAGGCTAAA-ATTCAGGACAAGGAAGGCATTCCTCCGGACCA 15231470
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| |||||||||||||| || || || ||||||||| | | | || | ||||||||
Sbjct 15231469 GCAGCGTTTGATCTTTGCTGGAAAGCAACTGGAGGATGGCCGCACCCTGGCGGATTATAA 15231410
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| |||||||| || || || ||||||||| | || | || || |||
Sbjct 15231409 CATCCAAAAGGAGTCTACTCTTCACTTGGTGCTCCGCCTCCGTGGTGGC 15231361
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || || ||||| || || || |
Sbjct 15232508 GATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCCTC 15232449
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || ||||||||| ||||| || || || || || || ||
Sbjct 15232448 GGATACCATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 15232389
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| |||||||||||||| || || ||||| ||||||
Sbjct 15232388 GCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGAT 15232352
>seq14
Length=24379743
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || || || || | |
Sbjct 11038759 GATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACAATCACCCTTGAGGTTGAGAGCTC 11038818
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| ||||| || |||||||| || || || || |||||
Sbjct 11038819 AGACACCATTGATAATGTGAAAGCTAAGATTCAGGACAAAGAGGGGATCCCACCTGATCA 11038878
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||||| ||||| ||| |||||||| | | | || |||| |||||
Sbjct 11038879 GCAGCGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGCACCTTGGCAGACTATAA 11038938
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| |||||||| ||||| | ||| ||||
Sbjct 11038939 CATCCAAAAGGAGTCGACCTTGCACCTGGT 11038968
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || | || || || | |
Sbjct 11039216 ATGCAGATCTTTGTCAAGACTCTGACAGGGAAGACGATCACTTTGGAGGTGGAGAGCTCT 11039275
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||| || ||||| |||||||| ||||| || ||
Sbjct 11039276 GACACCATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATCCCTCCAGACCAG 11039335
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || || || |||||| | | || ||||||| |||
Sbjct 11039336 CAGCGTCTTATCTTTGCTGGAAAGCAACTTGAGGATGGACGCACGCTGGCAGATTACAAC 11039395
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||| |||||||| || || ||||||||| ||||
Sbjct 11039396 ATTCAGAAGGAATCTACCCTTCACTTGGTGCTGCG 11039430
Score = 107 bits (118), Expect = 2e-18
Identities = 158/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| || || || || || || || ||||| || || || || || | |
Sbjct 11038988 ATGCAGATCTTCATCAAGACCCTTACAGGGAAGACTATCACCCTTGAGGTTGAGAGCTCA 11039047
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||| || || || || || || || || |||||
Sbjct 11039048 GACACCATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGCATCCCACCTGATCAG 11039107
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880
|| || |||| ||||| ||||| ||||| |||||| ||| ||| | |||||||
Sbjct 11039108 CAGCGCCTGATATTTGCTGGGAAGCAGCTTGAGGATGGTCG---CACATTAGCAGATTAC 11039164
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||| ||||| || || || || |||||||| | |||||
Sbjct 11039165 AACATCCAAAAAGAGTCCACTCTTCACTTGGTCCTCCGATT 11039205
Score = 107 bits (118), Expect = 2e-18
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || |||| || || || ||||| | || || || |
Sbjct 11039444 ATGCAGATCTTTGTTAAGACTTTAACAGGGAAGACAATTACCTTGGAGGTGGAGAGTTCT 11039503
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||| || ||||| || || ||||| || |||||
Sbjct 11039504 GACACCATTGATAATGTGAAGACAAAGATTCAGGACAAGGAGGGCATACCCCCTGATCAG 11039563
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| || | |||||||||||||| |||||||||||| ||| | | || |||| || |
Sbjct 11039564 CAGCGCCTCATCTTTGCCGGGAAGCAGCTGGAGGATGGTCG-CACTCTTG-CAGACTACA 11039621
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||||| || ||||| || || ||| | || ||||
Sbjct 11039622 ACATTCAGAAAGAATCAACTCTTCACCTTGTCCTGCG 11039658
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || ||||| || || || || ||||| || || || |
Sbjct 6042045 GATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 6042104
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 6042105 GGACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGATCA 6042164
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| || || || ||||| |||||| | | | | | || || ||
Sbjct 6042165 GCAGCGCCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTACAA 6042224
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|| || ||||| || || || ||| | || | || | ||||| ||||
Sbjct 6042225 TATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTCCGCGGCGGCG 6042274
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || ||||| || || || || || || || || || |
Sbjct 6055344 GATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTCGAGTCCTC 6055403
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 6055404 GGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGATCA 6055463
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| ||||| || ||||| |||||| | | | | | || || ||
Sbjct 6055464 GCAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTACAA 6055523
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|| || ||||| || || || ||| | || | || | ||||| ||||
Sbjct 6055524 TATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTCCGCGGCGGCG 6055573
>seq17
Length=6372654
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | ||||| || || || || || || || ||||| || || |
Sbjct 622183 ACCATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACAATCACCCTCGAGGTGGAGTCT 622242
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
|||||||| | || | || || |||||||| ||||| || || || || || |||
Sbjct 622243 TCCGACACAATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGAT 622302
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || | ||||| ||||| || ||||| |||||| | | | | | || ||
Sbjct 622303 CAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGGACCCTCGCCGACTAC 622362
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|||||||| ||||| || || || ||| | || | || | ||||| ||||
Sbjct 622363 AACATTCAGAAGGAGTCCACCCTCCACCTCGTCCTTCGTCTCCGCGGCGGCG 622414
>seq1
Length=68435666
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| ||||| || || || || || || || |
Sbjct 29766743 GATGCAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTCGAGTCCTC 29766684
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 29766683 GGACACGATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 29766624
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||| |||||||||||||| || || || | | | | || |||||
Sbjct 29766623 GCAGAGGCTCATCTTCGCCGGGAAACAGCTTGAAGACGGCAGGACCCTCGCCGACTATAA 29766564
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 29766563 TATCCAGAAGGAGTCGACCCTCCACTTGGTG 29766533
>seq6
Length=44357769
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || | || || || | |
Sbjct 21861206 GATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTTTGGAGGTCGAGTCGTC 21861147
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || ||||| || || || || || ||
Sbjct 21861146 GGACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCGGACCA 21861087
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| ||||||| ||||| || |||||||| || | | | | | ||||||||
Sbjct 21861086 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACCCTCGCCGATTATAA 21861027
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||||||||||| || || || ||| | || | || | || ||||||
Sbjct 21861026 CATTCAAAAGGAGTCCACCCTCCACCTTGTCCTCCGTCTCCGTGGAGGC 21860978
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || | || || || | |
Sbjct 21860977 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGAGCTCG 21860918
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| ||||| || ||||| || || || || ||
Sbjct 21860917 GACACGATCGACAACGTCAAGGCCAAGATTCAAGATAAGGAAGGTATTCCGCCGGACCAG 21860858
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| ||||| || || || ||||| | | | | | |||||||||
Sbjct 21860857 CAGCGTCTGATCTTCGCCGGAAAGCAACTTGAGGACGGTCGCACCCTCGCCGATTATAAC 21860798
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||| || || || || || ||||| | || | || |||||
Sbjct 21860797 ATCCAAAAAGAGTCTACTCTTCATCTGGTGCTCCGCCTCCGTGGAGG 21860751
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || ||||| || || | |
Sbjct 21860750 GATGCAGATCTTTGTGAAGACCCTCACGGGAAAGACGATCACCCTCGAGGTGGAGAGCTC 21860691
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || |||||||| || || || || || || || || ||
Sbjct 21860690 GGATACCATTGATAATGTCAAGGCGAAGATCCAGGATAAGGAGGGGATTCCGCCGGACCA 21860631
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||| || |||||||| ||||| ||||| || | | | | || |||||
Sbjct 21860630 GCAGAGGCTGATATTCGCCGGGAAGCAGCTTGAGGACGGCAGGACCCTTGCCGACTATAA 21860571
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || || || || ||||| | || | ||||| ||
Sbjct 21860570 TATTCAGAAGGAGTCCACCCTCCATCTGGTGCTCCGTCTTCGCGGTGG 21860523
>seq2
Length=65558141
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || |||||||| ||||| ||||| || ||
Sbjct 62822726 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACTATTACCCTCGAGGTAGAGTCCTCC 62822667
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 62822666 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAG 62822607
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| ||||| || ||||| ||||| | | | | | ||||| |||
Sbjct 62822606 CAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGATTACAAC 62822547
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAA 24935
|| || ||||| || || || ||| | || | || | || || |||| ||
Sbjct 62822546 ATCCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGCCTCCGGGGTGGCGCAA 62822495
>seq29159
Length=2312
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || || || || || || || ||||| || | |
Sbjct 1761 GATGCAGATCTTTGTTAAGACTCTCACTGGCAAGACCATCACCCTTGAAGTTGAGAGCTC 1820
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || || || || || ||||| || ||
Sbjct 1821 GGACACCATTGATAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCA 1880
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| |||||||| || |||||| | | || | || || ||
Sbjct 1881 GCAGAGGCTCATCTTTGCTGGGAAACAACTTGAGGATGGCCGCACTTTGGCTGACTACAA 1940
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||| || || || || ||||| ||| | || |||||
Sbjct 1941 CATCCAGAAAGAGTCAACACTCCACCTTGTCTTGCG 1976
>seq5
Length=51955539
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || || ||||| || || || |
Sbjct 10327813 GATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 10327872
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| |||||||| || || || || || ||
Sbjct 10327873 GGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCGGACCA 10327932
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||| ||||| |||||||| || || | | | | | || |||||
Sbjct 10327933 GCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCACCCTCGCCGACTATAA 10327992
Query 24883 CATTCAAAAGGAATCGACACTACA 24906
||| || ||||| || || || ||
Sbjct 10327993 CATCCAGAAGGAGTCCACCCTCCA 10328016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449672308153080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |