Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 3e-14 >seq12 Length=28800575 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| || ||| | || || || ||||| ||| | || ||| ||| Sbjct 14046376 ATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTAGAGAGCTC- 14046434 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || | | | | ||||| ||||| ||||| || ||| | || ||||| Sbjct 14046435 CGACACCATTGACAATGTAAAGGCTAAGATCCAGGATAAGGAGGGCATCCCACCAGATCA 14046494 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || || | ||| ||||||||||||||||| | ||| |||| |||||||| Sbjct 14046495 GCAGCGTCTCATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACACTGGCAGACTACAA 14046554 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||| ||||| Sbjct 14046555 CATTCAAAAGGAATCTAC 14046572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 ||||| || ||| | || ||||||||| | ||||| | ||| ||||||||||||||| Sbjct 14035429 GATAAGGAGGGCATCCCACCAGATCAGCAGCGGCTTATCTTTGCTGGTAAACAGCTGGAG 14035488 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTAC 107752 || | || |||| |||||||||||||||||||| ||||| Sbjct 14035489 GATGGGCGCACGCTGGCAGACTACAACATTCAAAAGGAATCTAC 14035532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| |||||||| || || | || || || ||||| || | ||| |||| ||| | Sbjct 14046604 ATGCAGATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTCTGGAAGTGGAGAGCTCG 14046663 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || ||||| || || ||||| | ||| ||||| Sbjct 14046664 -GACACCATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCTGATCA 14046722 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || || ||||| ||||| | || ||||||||||||| Sbjct 14046723 GCAGAGGCTTATTTTTGCCGGGAAGCAGCTTGAGGATGGGCGTACCCTGGCGGACTACAA 14046782 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||| ||||||||||| || Sbjct 14046783 CATCCAAAAGGAGTCCAC 14046800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398682051020029