Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq40061 594 6e-165 seq14 179 4e-40 seq1 147 2e-30 seq4 95.1 1e-14 seq357 82.4 8e-11 >seq40061 Length=156973 Score = 594 bits (658), Expect = 6e-165 Identities = 729/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Minus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 |||||| | ||| |||| ||| | |||||| | || |||| ||||||||||| | Sbjct 1137 TTCTGCAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 1078 Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169 ||||| || || || | | |||||| |||| |||||| | || ||| | || || || Sbjct 1077 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTCATTATCGCCTTCATTGCTGCTCC 1019 Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229 ||| || ||||| || |||||||| ||||||||| |||||||||| | ||||| ||||| Sbjct 1018 TCCAGTAGATATTGATGGTATTCGTGAACCAGTTTCTGGTTCTCTACTTTATGGAAACAA 959 Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289 || ||||||||||| || |||| |||| || |||||| | || || || || || Sbjct 958 TATTATCTCTGGTGCCATTATTCCGACTTCTGCAGCTATCGGTTTGCATTTTTATCCGAT 899 Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349 |||||||| ||||| ||||||||||| | ||||| || ||||||| | || | || Sbjct 898 ATGGGAAGCGGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 839 Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409 | |||||| | | || | | || ||||| ||||||||||||||| || ||| Sbjct 838 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 779 Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469 | |||||||| || ||||| |||||| || || || || || || ||||| | ||| Sbjct 778 CCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 719 Query 157470 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 157529 || ||| | |||| ||| | |||||||| |||||| |||| ||||||| | || || Sbjct 718 TGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 659 Query 157530 CTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCC 157589 ||||||||||| |||| ||| | || |||||||| || ||||| || ||||||||||| Sbjct 658 ATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAACACAACATCCTTATGCATCC 599 Query 157590 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 157649 || |||||| | || || ||||| |||||||| || || | ||| ||||||||| || Sbjct 598 ATTTCACATGTTGGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 539 Query 157650 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATG 157708 | || || | || | ||| || | ||||| ||||||| || || || | Sbjct 538 TTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGCGG 480 Query 157709 GTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCG 157768 |||||| ||||||||||| ||||| || || || ||||| ||||| || ||||| || | Sbjct 479 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 420 Query 157769 GTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCG 157828 | || ||||||||||||| ||| |||||||| | | || |||||| | | Sbjct 419 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACATTTCTTCTTGG 360 Query 157829 CCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 157888 | || |||||||| || || |||||||||||||| | || | || || ||||| |||| Sbjct 359 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 300 Query 157889 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 157948 |||| || |||||||| |||||||| || | |||| ||||||||||||| | |||| Sbjct 299 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTTATCAACA 240 Query 157949 CCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158008 | ||||| ||| || | || || ||| |||||||||||||| |||||||| ||||| | Sbjct 239 CTTGGGCTGATATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATG 180 Query 158009 CACACAACTTCCCACTGGATCTTGCTGCTG 158038 | ||||||||||| || || || ||||||| Sbjct 179 CTCACAACTTCCCTCTAGACCTAGCTGCTG 150 Score = 560 bits (620), Expect = 1e-154 Identities = 719/985 (73%), Gaps = 6/985 (1%) Strand=Plus/Plus Query 158803 GGGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTACCCACTGCTTATCTTG 158862 |||| |||||||||||||| ||||||||||| || | || | || ||||||| | | Sbjct 33104 GGGACCGTTTCGTTTTTGTAGGCTGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCG 33163 Query 158863 CTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCG 158922 || | || |||||| |||| || || ||||| | || |||||||| |||||| | | Sbjct 33164 CTTTAGGAGGTTGGTTTACAGGTACAACTTTTGTAACTTCATGGTATACCCATGGATTGG 33223 Query 158923 CTACTTCCTATCTTGAGGGT-GCAAACTTTCTT-ACAGCAGCAGTTTCGACTCCAGCTGA 158980 | | ||||||| | || ||| |||| |||||| || || |||||||| ||||| || | Sbjct 33224 CCAGTTCCTATTTGGAAGGTTGCAA--TTTCTTGACCGCTGCAGTTTCCACTCCTGCGAA 33281 Query 158981 TGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAG 159040 | | | | ||||| | |||| || ||||| |||||||| ||||||||||| | Sbjct 33282 TAGTTTAGCACATTCCTTGTTGCTACTATGGGGCCCTGAGGCACAAGGGGATTTTACTCG 33341 Query 159041 GTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAAT 159100 ||| ||| | || || || |||| |||||| || ||||| |||| || | ||||| Sbjct 33342 TTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTCCATGGTGTTTTCGGACTAAT 33401 Query 159101 TGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATG 159159 ||||| ||| | || || || ||||| || || ||| | | | || || || |||| Sbjct 33402 AGGTTTTATGTTACGTCAATTCGAACTTGCTCGATCTGTGCAAT-TGCGACCTTATAATG 33460 Query 159160 CTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTG 159219 | || || ||||||| ||| |||||||||||||| || ||||| || || ||||| | Sbjct 33461 CAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTGG 33520 Query 159220 GTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTAC 159279 |||| || ||||||| || || || ||||| || || || ||||| | ||| | | Sbjct 33521 GTCAATCTGGTTGGTTCTTTGCGCCCAGTTTTGGCGTAGCAGCTATATTTCGATTCATCC 33580 Query 159280 TCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTG 159339 ||||| | |||||||| || |||||||| | ||||| || ||||||||||||||||| | Sbjct 33581 TCTTCTTCCAAGGGTTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCG 33640 Query 159340 GTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACATTAT 159399 | | |||| | || || |||| ||||||||||| | || || |||||||| |||| Sbjct 33641 GAGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTAT 33700 Query 159400 ACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGA 159459 ||| ||||| || ||||| || || || ||| | ||||||||| || |||| Sbjct 33701 TCGAAGATGGTGACGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAGA 33760 Query 159460 CTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTA 159519 ||||||| ||||||||||| |||||||| ||||| || ||||| || |||| ||||| | Sbjct 33761 CTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCA 33820 Query 159520 ACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCA 159579 | || || ||| | |||||||||||| | ||||| || || | ||| |||||| Sbjct 33821 ATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCAGTAACCGGTTTATGGATGAGTG 33880 Query 159580 GTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGA 159639 | |||| | | || || ||||| || || ||||| || || ||||| ||||| | Sbjct 33881 CTCTTGGGGTAGTCGGCCTGGCTCTGAACCTCCGTGCCTATGACTTCGTTTCCCAAGAAA 33940 Query 159640 TCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATG 159699 || | ||||| |||||||| |||||||| || ||||||||||| || || || | || | Sbjct 33941 TCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATCCTCTTAAACG 34000 Query 159700 AAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAG 159759 |||| | ||||||||| |||| || ||||| || ||||||||| | || ||||| | Sbjct 34001 AAGGTATTCGTGCTTGGATGGCGGCTCAGGATCAGCCTCATGAAAACCTTATATTCCCTG 34060 Query 159760 AAGAAGTTCTACCAAGAGGTAACGC 159784 | || |||||||| | || ||||| Sbjct 34061 AGGAGGTTCTACCCCGTGGAAACGC 34085 >seq14 Length=24379743 Score = 179 bits (198), Expect = 4e-40 Identities = 246/344 (72%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 159159 GCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTT 159218 || ||||| ||||||| ||| |||||||||||||| | ||||| || || ||| | Sbjct 16929123 GCAATTGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTATATTCCTGATTTATCCATTG 16929182 Query 159219 GGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTA 159278 |||| || ||||||| || || || ||||| || || | ||||| ||| | Sbjct 16929183 GGTCGATCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAACTATATTTCTATTCATC 16929242 Query 159279 CTCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCT 159338 || || | ||| |||| | |||||||| | ||||| || |||||||||||||||||| Sbjct 16929243 CTTTTTTTCCAAAGGTTTTATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCT 16929302 Query 159339 GGTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACATTA 159398 || | |||| | || || |||| ||||||||||| | || || ||||||| ||| Sbjct 16929303 GGAGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATATTTTA 16929362 Query 159399 TACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAG 159458 | ||| ||||| || ||||| || || | || ||| | ||||||||| || ||| Sbjct 16929363 TTCGAAGATGGTGACGGTGCAAATACATTCCATGCTTTTAACCCAACTCAAGCTGAAGAG 16929422 Query 159459 ACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 159502 |||||| ||||||||| | || ||| ||||| || ||||| Sbjct 16929423 ACTTATGTAATGGTCACTACTCACTACTTTTGGTCCCAAATCTT 16929466 >seq1 Length=68435666 Score = 147 bits (162), Expect = 2e-30 Identities = 203/280 (73%), Gaps = 3/280 (1%) Strand=Plus/Plus Query 157760 GTTACTTCGGTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTT-CAC 157818 |||| || || || |||||||| |||| || |||||||| | | |||| || Sbjct 3686462 GTTATTTTGGCCGATTGATCTTCTAATATACTAGTTTCAACAATT-CTCATTTCTTACAT 3686520 Query 157819 TTCTTCCTCGCCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 157878 |||||| | || | |||||||| || | |||||||||||||| | | | || || Sbjct 3686521 TTCTTCTTGGCTGTTTGGCCTGTAGTAAGTATCTGGTTCACTGCTTTAAGTATTAGTACT 3686580 Query 157879 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGT 157938 ||| | || ||||| || | |||||| |||||||| || | |||| ||||| || || Sbjct 3686581 ATGACTTTTAACCTAAATGATTTCAA-TTCAACCAATCTGTAGTTGACCGTCAGAGTTGT 3686639 Query 157939 GTGTTGAACACCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCAT 157998 || | || || ||| | ||| || | || ||||| ||||||||||||||| |||||| Sbjct 3686640 GTTATCAATACTTGGACTGATATCATCAATTGCGCTAATCTTGGTATGGAAGTAATGCAT 3686699 Query 157999 GAGCGTAACGCACACAACTTCCCACTGGATCTTGCTGCTG 158038 || ||||| || ||||||||| | || || || ||||||| Sbjct 3686700 GAACGTAATGCTCACAACTTCTCTCTAGACCTAGCTGCTG 3686739 >seq4 Length=57251647 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 159387 GAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACT 159446 |||||||| |||| ||| ||||| || ||||| || || || ||| | ||||| Sbjct 3793182 GAAAATACTTTATTCGAAGATGGTGACGGTGCAAATACGTTCCGTGCTTTTAACCCAACT 3793241 Query 159447 CAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGC 159506 |||| || ||||||||||| ||||||||||| |||| ||| ||||| || ||||| || Sbjct 3793242 CAAGCTGAAGAGACTTATTCAATGGTCACTGCTAACCACTTTTGGTCCCAAATCTTTGGG 3793301 Query 159507 ATTGCGTTTT 159516 |||| |||| Sbjct 3793302 GTTGCTTTTT 3793311 >seq357 Length=580603 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159593 TGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGA 159652 ||| || ||||| || || ||||| || || ||| | ||||| ||| |||||||| Sbjct 527712 TGGCCTGGCTCTGAACCTCCGTGCCTATGACTTCATTTCCCAAGAAATCCATGCAGCAGA 527653 Query 159653 AGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTT 159692 |||||| |||||||| || ||||||||||| || |||||| Sbjct 527652 AGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 527613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545000547428880