Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14 262 3e-64 seq10 224 7e-53 seq5 150 1e-30 seq11 125 5e-23 seq4 120 2e-21 seq8 114 1e-19 seq16 86.0 5e-11 seq12 86.0 5e-11 >seq14 Length=24379743 Score = 262 bits (290), Expect = 3e-64 Identities = 700/1058 (66%), Gaps = 14/1058 (1%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||||| || |||||||| ||||| | |||||| ||| ||| || || ||| Sbjct 1425799 GCAGAGACATTCAGGATACCATTAGCATCAATATCAAAGCAGACAGTAATCTGTGGAACC 1425740 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || || ||||||| || || || | | |||| |||| ||| ||| ||||| || Sbjct 1425739 CCCCTAGGAGCAGGCGGAATGCCAGAGAGCTCAAATTTTCCAAGAAGATTGTTATCCCTA 1425680 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || ||| ||||||||| ||| ||| || || ||| ||| || || || || Sbjct 1425679 GTCCTGGTTCTTTCACCCTCATAAACTTGAATCAGGACACCAGGTTGGTTGTCAGAGTAG 1425620 Query 281606 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 |||| || || ||| || || ||||| || ||||| || || | | ||| Sbjct 1425619 GTTGAGAAGAC-CTGCTCCTTCTTGGTGGGAATGGTGGTGTTCCTTGGTATCAAAACGGT 1425561 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | |||||||| || || || ||||||||||| ||||||||||| | || | | Sbjct 1425560 CATTACTCCACCAGCAGTCTCCAAGCCAAGAGAAAGTGGAGTGACATCCAACAGTAGCAG 1425501 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783 | || | || |||| | |||| |||| || || || || | ||||||||||| Sbjct 1425500 GTCCTGTACCTTCTCATTGCCCTCACCACTCAAG-ATGGCAGCCTGCACAGCAGCACCAT 1425442 Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 281843 | |||||||| || |||||||| | | ||| | | ||| |||||||| || | Sbjct 1425441 AAGCAACAGCCTCGTCAGGATTGATACTTTTGCACAACTCTTTCCCATTGAAGAAGTCCT 1425382 Query 281844 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 281903 || || || ||| ||||||| | | || || ||||| | |||| ||||| | Sbjct 1425381 GCAGTAGCTGCTGCACCCTAGGAATTCTGGTGGACCCACCAACAAGGACAACATCATGGA 1425322 Query 281904 C-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | ||| || |||| ||||| ||| ||| ||| ||||| || || | || Sbjct 1425321 CACTG-CTCTTGTCCATTTTTGCATCTCTCAAACATTTCTCAACAGGCTCCATACACTTC 1425263 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 282022 || |||||||| || ||||| || || | |||| ||| | ||||| Sbjct 1425262 CTGAACAAGTCCATGTTTAGCTCTTCAAAACGGGCCCGTGTAATGGTGGTGTAGAAATCA 1425203 Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 282082 || || || |||| || |||| || || || || |||| | || || || | | | Sbjct 1425202 ATGCCCTCATACAAGGAGTCAATCTCTATAGTCGTCTGAGCAGTGGAGGAGAGAGTTCTT 1425143 Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AGGCTTTTGCTGATTGATTCAAATC 282141 || || | |||||||| |||||| || || | | || | | | | | | | | || Sbjct 1425142 TTTGCCCTTTCACATGATGTCCTGAGCCTCCTAAGAGCCCTAGGGTTACCG-CTGATGTC 1425084 Query 282142 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 282201 |||| | ||||||||||| || | |||| | | || | || ||||||||||| Sbjct 1425083 CTTTTTGTGCTTTCTCTTGAACTCCTGAACAAAGTGGTTGACCATGCGGTTATCAAAATC 1425024 Query 282202 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAG 282261 || ||||| | | ||| | || | ||||| | || | |||| || ||||||| Sbjct 1425023 CTCTCCTCCAAGATGAGTGTCACCAGCAGTAGCCTTCACCTCAAAAATACCCTCTTCAAT 1424964 Query 282262 AGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 282321 | | |||| |||||| || |||||||| | ||||| || || |||||| | || Sbjct 1424963 GGTGAGCAGAGAGACATCAAAAGTGCCACCACCAAGGTCAAAGATGAGAACATTCTTCTC 1424904 Query 282322 -----TTTGTCTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 || | ||| ||||| |||||||| |||| ||||| || || || ||||| Sbjct 1424903 ACCAACACTTCCAGCTTTCTTATCTAGACCATAAGCAATGGCAGCTGCTGTGGGCTCATT 1424844 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 || ||||||| ||||| ||||||| ||| || ||||| || ||||| || | || Sbjct 1424843 GATGATTCTCATTACATTGAGACCAGAAATAACACCAGCATCCTTGGTGGCCTGGCGCTG 1424784 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 |||||||| || || ||||||||||||| ||| |||| Sbjct 1424783 AGAATCGTTGAAGTAAGCAGGAACAGTAACAACAGCAT 1424746 >seq10 Length=31890735 Score = 224 bits (248), Expect = 7e-53 Identities = 748/1146 (65%), Gaps = 26/1146 (2%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||||| ||||||||||| ||| | |||||| ||| |||||||| || || || Sbjct 3317652 ACATTAAAAATACCATTGGAATCAATATCAAAGCAGACAGTGATTTGAGGTACACCCCTT 3317711 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA--TTATTATCTTTAGTGA 281549 ||||||| ||||||| | | |||| ||||| | || || || || || || Sbjct 3317712 GGAGCAGGGCGGATCCCAGAAAGCTCAAAT-TTCCCT-ACTAGGTTGTTGTCCTTTGTCC 3317769 Query 281550 ATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTG 281609 | |||||||| | | || ||| || ||| |||||| || || | || | Sbjct 3317770 TCGCCCTCTCACCCTCATAGACTTTGATCAAGACATCAGGTTGATTGTCGGAGTTGGTGG 3317829 Query 281610 TAAATACTCTGGAT--TTTTTACAAGGAATTGTTGTGTTTCTATCAAT-AATATTGGTCA 281666 || ||| ||| || || ||| || || ||||| || ||| || | || ||| Sbjct 3317830 AGAAGACTT--GATCCTTCTTGGTAGGGATGGTGGTGTTCCTTGGAATCAACACTG-TCA 3317886 Query 281667 TAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT 281726 | | || ||||| || || || ||||| ||||||||||||||||| | | | || | Sbjct 3317887 TGACTCCTCCAGCAGTCTCCAATCCAAGGGAAAGAGGAGTGACATCCAGCAACAGAAGGT 3317946 Query 281727 TTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATAT 281785 || | ||||| || | |||| ||||| | || || |||| ||||||||||||| Sbjct 3317947 CCTGCACTTTTTTATTGCCCTCACCACTCAAGA-TGGCGGCCTGAACAGCAGCACCATAT 3318005 Query 281786 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 281845 ||||||||||||||||| || | | | | | |||| || |||||||| |||| | Sbjct 3318006 GCAACAGCTTCATCAGGGTTGATACTCTTACAGAGTTCCTTCCCATTGAAGAAATCCTGA 3318065 Query 281846 AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACC 281905 || ||||| || | || || | | |||||| || || | |||| |||||| || Sbjct 3318066 AGCAGTTGCTGGACTCTGGGTATCCTGGTTGATCCACCTACAAGAACAACTTCATGGAC- 3318124 Query 281906 TGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCT 281964 || | || ||| || ||||| | ||||||||| || || | | | | Sbjct 3318125 TGAACTCTTGGCCATCTTAGAATCTCTCAGGCATTTTTCAACAGGCTCCATGCACTTTTT 3318184 Query 281965 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 282024 || | || ||||| ||||| | || | || | || | ||||||| Sbjct 3318185 GAAAAGATCCATGTTGAGTTCCTCGAACCTTGCCCGGGTGATGGTTGAGTAGAAATCAAT 3318244 Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084 ||||| || | |||||||| || || || ||||| | | ||| |||| | | ||| Sbjct 3318245 GCCTTCAAATAGAGAATCAATCTCGATTGTGGTTTGGGCAGTAGATGATAAAGTTCTTTT 3318304 Query 282085 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTC--AAATC 282141 || | |||||| || ||||| || || | |||| || | | ||||| || | ||| Sbjct 3318305 TGCCCTTTCACAAGCAGTCCTCAGCCTCC-TAAGAGCCCTAG--GATTGCCTCTGATATC 3318361 Query 282142 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 282201 | || | || | |||||| || | |||| | | || | ||| || ||||| || Sbjct 3318362 CTTCTTGTGCTTCCACTTGAACTCATGAACAAAGTGGTTCACCATACGGTTGTCAAAGTC 3318421 Query 282202 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAG 282261 ||||| ||||| | || | || | || || | || | |||| ||| |||||| Sbjct 3318422 CTCACCACCCAAATGGGTGTCACCAGCAGTGGCCTTCACCTCAAAAATTCCCCCTTCAAT 3318481 Query 282262 AGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 282321 || | || | |||||| || |||||||| | |||||||| || | |||| | || Sbjct 3318482 AGTGAGGAGGGAGACATCAAAAGTGCCACCACCAAGGTCAAAAATGAGAATATTCTTCTC 3318541 Query 282322 TT------TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 || | || || ||||||||||| |||| |||||||| || || ||||| Sbjct 3318542 CCCAGCGCTGCCAGCCTTCTTGTCAAGACCATAAGCAATGGCAGCAGCTGTGGGCTCATT 3318601 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 ||| || | || ||||| || || ||||| || ||||| || || ||||| | ||| Sbjct 3318602 AATGATACGCATGACATTGAGGCCTGCAATGACACCAGCATCCTTTGTAGCTTGCCGTTG 3318661 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 ||| || || || || ||||| ||||||| ||| |||| | ||| |||| || Sbjct 3318662 TGAGTCATTGAAGTAAGCAGGGACAGTAACAACAGCATTCTTAACTGTAGAGCCAAGGTA 3318721 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 ||| || ||| |||||| | || | ||| || || |||| ||||| || | | Sbjct 3318722 AGCCTCCGCAATTTCACGCATTTTCATCAACACCATAGAGGATATTTCTTCTGCAGCAAA 3318781 Query 282556 TTGCTT 282561 ||| || Sbjct 3318782 TTGTTT 3318787 Score = 98.7 bits (108), Expect = 7e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || ||| ||||| || || ||||| ||||| |||| |||| || |||||| Sbjct 19659103 CCATATGAAAGAGCTGCAGCCGTAGGCTCATTGATAATCCTCAGTACATCCAGTCCAGCA 19659162 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||||| || ||||| || || || || | ||| | ||| ||||| || |||||||| || Sbjct 19659163 ATTCTCCCGGCATCCTTTGTCGCCTGGCGTTGGGCATCATTAAAGTAGGCAGGAACTGTG 19659222 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 || || || | | || ||| |||| |||||| ||| || | ||||| || | Sbjct 19659223 ATGACAGCTTTGGAAACAGTTTTACCAAGATAAGCCTCTGCAGTCTCCTTCATCTTGGTG 19659282 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCT 282560 | | | || |||||| ||| |||||||||| Sbjct 19659283 AGGACGAATGCCCCAATTTGGCTTGGGGAATATTGCT 19659319 Score = 98.7 bits (108), Expect = 7e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 || || ||||| || | ||| ||||| ||||||||||| || |||||| |||| ||| Sbjct 22320246 AATCCATATGCCAGTGATGCGGCAGTAGGTTCATTAATGATGCGAAGAACTTCTAGACCA 22320305 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 ||||| | ||| ||| ||||||| || |||| ||||||||| ||||| || || Sbjct 22320306 GCAATACGACCAGCATCCTTAGTTGCTGTCCTTTGTGAGTCATTAAAGTATGCAGGAACT 22320365 Query 86236 GTAATAACTGCTTTATTAA 86254 |||| ||||||||| ||| Sbjct 22320366 GTAACCACTGCTTTAGTAA 22320384 Score = 93.3 bits (102), Expect = 3e-13 Identities = 130/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 || ||||| |||| |||||| | || | | |||| |||| | |||| ||| Sbjct 22320195 GTACCACCTCCCAGATCAAATACTAGAA---TGGTTTCATTGTTCTTCTTTT---CAAAT 22320248 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| || | | || ||||| ||||||||||| || | | ||| | ||||||||| Sbjct 22320249 CCATATGCCAGTGATGCGGCAGTAGGTTCATTAATGATGCGAAGAACTTCTAGACCAGCA 22320308 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || | || ||||| ||||| ||| |||||||| || ||||| ||||||||||| ||| Sbjct 22320309 ATACGACCAGCATCCTTAGTTGCTGTCCTTTGTGAGTCATTAAAGTATGCAGGAACTGTA 22320368 Query 282464 A 282464 | Sbjct 22320369 A 22320369 >seq5 Length=51955539 Score = 150 bits (166), Expect = 1e-30 Identities = 531/819 (65%), Gaps = 28/819 (3%) Strand=Plus/Plus Query 281754 CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTT 281813 ||||| | || || || | ||||||||| || |||||||| ||||||||||| | | | Sbjct 1653751 CAAGA-TGGCAGCCTGCACAGCAGCACCGTAAGCAACAGCCTCATCAGGATTGATACTCC 1653809 Query 281814 CATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGA 281872 || |||||||| |||| || || | | ||| ||| | ||||| | Sbjct 1653810 -----------TTCCCATTGAAGAAATCCTGCAACA-GCTGTTGGACCCTGGGAATTCTG 1653857 Query 281873 GATGATCCTCCAACTAATACAATTTCATGCAC-CTGTGATTTATCCAGTTTTGAATCCAA 281931 | || || ||||| | || | |||||| | ||| ||| |||| ||||| |||| Sbjct 1653858 GTGGACCCACCAACAAGGACTACTTCATGGATACTGCT-TTTGTCCATTTTTGCATCCCT 1653916 Query 281932 TAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC--TGAACAAAGTTCTTCG 281989 | | || |||||||| || | || || |||||||| || || |||||| Sbjct 1653917 CAGACACTTCTCAACGGGCTCCATACACTTCCTGAACAAGTCCATGTTTAAC--TCTTCG 1653974 Query 281990 AATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCA 282049 || || | || | ||| | |||||||||| || |||| | ||||| ||| Sbjct 1653975 AACCGGGCCCGTGTGATGGTGGAGTAGAAATCAATTCCCTCACACAAGGTATCAATCTCA 1654034 Query 282050 ATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGT 282109 || ||||| |||| | || || || | | || || | ||||||| |||||| || Sbjct 1654035 ATTGTAGTCTGAGCAGTGGAGGAGAGAGTTCTCTTTGCCCTCTCACATGATGTCCTAAGC 1654094 Query 282110 CTTCGTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTC 282168 || | |||| || | | | | | | || |||| | ||||||||||| || | Sbjct 1654095 CTCC-TAAGAGCCCTAGGGTTTCCACTGATGTCCTTTTTGTGCTTTCTCTTGAACTCCTG 1654153 Query 282169 AACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGA 282228 |||| | | || | || ||||||||||| |||||||| | | ||| | || | Sbjct 1654154 AACAAAGTGGTTGACCATGCGGTTATCAAAATCCTCACCTCCAAGATGAGTGTCACCAGC 1654213 Query 282229 CGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCC 282288 ||||| | || | || | || || |||| | | |||| |||||| || || Sbjct 1654214 AGTAGCCTTCACCTCAAATATACCCTCCTCAATGGTGAGCAGAGAGACATCAAAAGTGCC 1654273 Query 282289 ACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGG----TTTTTATCAAG 282342 |||||| | ||||| || || | |||| | || | | || || ||||| || Sbjct 1654274 ACCACCAAGGTCAAAGATGAGAATATTCTTCTCACCGACACTTCCAGCCTTCTTATCGAG 1654333 Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 |||| | |||| ||||| || || || ||||| || ||||||| ||||| |||||||| Sbjct 1654334 ACCAAAAGCAATGGCAGCTGCTGTGGGCTCATTGATGATTCTCATGACATTGAGACCAGC 1654393 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 ||| || ||| | || || || || | || ||||| || || | ||||||||||| Sbjct 1654394 AATAACACCAGCAGCCTTGGTAGCCTGGCGATGAGAATCATTGAAGCAAGCAGGAACAGT 1654453 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522 || ||| |||| | || || | || || || |||| ||||| || | Sbjct 1654454 AACAACAGCATTCTTAACAGTGGAACCCAAGTAGGCCTCCGCAGTTTCCTTCATCTTCAT 1654513 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTT 282561 |||| ||| || ||||||| ||||| | | | ||||| Sbjct 1654514 CAAAACCATCGAAGAAATTTCTTCTGCTGCAAACTGCTT 1654552 Score = 138 bits (152), Expect = 8e-27 Identities = 311/464 (67%), Gaps = 14/464 (3%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 ||||||| || || ||| ||||||| ||||| || || || | | ||||| |||| Sbjct 48149433 AATCAATACCCTCATACAGGGAATCAATCTCAATGGTGGTCTGGGCAGTCGAAGAGAGTG 48149374 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 282137 | || || | ||||| |||||||| | ||| | | ||| | | ||| | Sbjct 48149373 TCCTCTTCGCTCTCTCACAAGCTGTCCTCAATCTCCTCAGGGCCCGGG--GGTTGCCACT 48149316 Query 282138 AATCTGTTTTATAT--TTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTA 282193 ||| | || | | || |||||||| || | |||| | ||| | || | || || Sbjct 48149315 AATGTCCTTCTTGTGCTTCCTCTTGAACTCCTGAACAAA--ATGGTTGACCATCCGGTTG 48149258 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| || ||||| || | | || | || | || || | || | || | || Sbjct 48149257 TCAAAGTCCTCACCACCAAGGTGGGTGTCACCAGCAGTCGCCTTCACCTCAAAGATACCT 48149198 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 ||||||| | | ||||| |||||| ||| |||||||| | || || ||||| ||| Sbjct 48149197 TCTTCAATGGTGAGAAGAGAGACATCAAAGGTGCCACCACCAAGGTCGAAGATAAGAACA 48149138 Query 282314 TTCATTTCTTT------GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 ||| | || | | | || || ||||||||||| |||| ||||||||| ||| Sbjct 48149137 TTCTTCTCGCTAGAGCTGCCAGCCTTCTTGTCAAGACCATAGGCAATAGCAGCAGCGGTT 48149078 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| ||||||| || |||||| || |||| ||| || |||||||| ||||| Sbjct 48149077 GGCTCATTGATAATTCGCATAACATTGAGGCCAGAAATGACACCAGCATCTTTGGTGGCC 48149018 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || | || || ||||| || || ||||| || |||| ||| || Sbjct 48149017 TGACGCTGGGAGTCGTTGAAGTAGGCAGGGACTGTAACAACTGC 48148974 Score = 131 bits (144), Expect = 1e-24 Identities = 314/467 (67%), Gaps = 16/467 (3%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 ||||||| || ||||||| ||||||| ||||| || ||||| | | || || || | Sbjct 1667781 AATCAATACCCTCGAACAGGGAATCAATCTCAATTGTGGTTTGGGCAGTGGATGACAGGG 1667722 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--AT 282134 | || || | ||||| |||||||| | || | |||| || | | ||| | Sbjct 1667721 TCCTCTTCGCTCTCTCACAGGCTGTCCTCAACCTCC-TAAGAGCCCGAG--GGTTGCCAC 1667665 Query 282135 TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATT 282192 | | ||| | || | ||||||||||| || | |||| | ||| | || | || || Sbjct 1667664 TGATATCCTTCTTGTGCTTTCTCTTGAACTCCTGAACAAA--ATGGTTCACCATTCGGTT 1667607 Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||||| || |||||||| | | |||| ||||| || ||| | || | ||| | || Sbjct 1667606 GTCAAAGTCCTCACCTCCAAGATGGGTATCTCCTGCGGTGGCTTTCACCTCGAAGATCCC 1667547 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || |||| | | || | |||||| ||| ||||| || | ||||| || || || Sbjct 1667546 CTCCTCAATGGTAAGGAGGGAGACATCAAAGGTACCACCTCCAAGGTCAAATATGAGAAC 1667487 Query 282313 ATTCATTTCTTTGTCT-TGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 282366 |||| | || | ||| ||||||||||||||||| |||| |||||||| || Sbjct 1667486 ATTCTTCTCACCAACGCTGGCAGCCTTTTTATCAAGACCATAGGCAATGGCAGCAGCTGT 1667427 Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 || ||||| || || | || ||||| || ||||| || || ||||| || ||||| Sbjct 1667426 GGGCTCATTGATGATACGCATGACATTGAGGCCAGCGATGACACCGGCATCCTTGGTGGC 1667367 Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || | ||||| || || || || ||||| || || | || |||| Sbjct 1667366 CTGCCGCTGTGAGTCATTGAAGTAAGCAGGGACGGTGACCACAGCAT 1667320 Score = 129 bits (142), Expect = 4e-24 Identities = 542/849 (64%), Gaps = 10/849 (1%) Strand=Plus/Minus Query 281633 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCA 281692 ||||| ||||||||||| ||| | ||||| | ||| || || || || | ||| Sbjct 48306639 GGAATGGTTGTGTTTCTTGGAATTAAGACAGTCATGACACCTCCTGCAGTCTCCAGTCCA 48306580 Query 281693 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 281752 || || || || || ||||| | || | || || || | || |||| | | ||| Sbjct 48306579 AGGGACAGGGGGGTAACATCCAACAGAAGAAGATCCTGCACCTTCTCATTACCCTCGCCA 48306520 Query 281753 ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTT 281812 | ||| || || || | |||||| ||||| || || || || ||||| || | | | Sbjct 48306519 CTCAAAATGGCAGCCTGCACAGCAGCCCCATAAGCCACTGCCTCGTCAGGGTTGATATTC 48306460 Query 281813 TCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACG 281871 | || | || ||||| || |||| || || || | | ||| | ||||| | Sbjct 48306459 TTGCATAACTCCTTCCCATTAAAGAAATCCTGCAACAACTGCTGC-ACCCTCGGAATTCT 48306401 Query 281872 AGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAA 281931 || || || ||||| | |||| |||||| || ||||||| ||| |||||| Sbjct 48306400 AGTGGAGCCACCAACAAGGACAACTTCATGGACGCTACTCTTATCCATTTTGGAATCCCT 48306341 Query 281932 TAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAA 281991 | | || || ||||| || | | || || | || ||| ||||| || Sbjct 48306340 CAGACACTTCTCTACGGGCTCCATGCACTTCCTGAAGAGATCCATGTTAAGCTCTTCAAA 48306281 Query 281992 TTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAAT 282051 | || | || | ||| | |||| || || || ||| ||||||| ||||| Sbjct 48306280 CCTGGCACGGGTGATGGTGGAGTAGAAATCGATGCCCTCATACAGGGAATCAATCTCAAT 48306221 Query 282052 CGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCT 282111 || ||||| | | ||| || || | | || || | ||||| |||||||| || || Sbjct 48306220 TGTGGTTTGGGCAGTAGATGAAAGGGTCCTCTTCGCCCTCTCACAAGCTGTCCTCAGCCT 48306161 Query 282112 TCGTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAA 282170 | |||| || | || | | | || | || | ||| |||||||| || | | Sbjct 48306160 CC-TAAGAGCCCTAGCATTTCCGGTGATGTCCTTCTTGTGTTTCCTCTTGAACTCCTGGA 48306102 Query 282171 CACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACG 282230 | | | || | || || ||||| ||||| || || | | || | || | | Sbjct 48306101 CGAAGTGGTTCACCAAGCGGTTGTCAAAGTCTTCTCCACCAAGGTGGGTGTCCCCAGCAG 48306042 Query 282231 TAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290 | || | || | || | || ||||||| | | |||| |||||| || || | Sbjct 48306041 TGGCCTTCACCTCAAAGATACCCTCTTCAATGGTAAGGAGAGAGACATCAAAAGTGCCCC 48305982 Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT-TGG-----TTTTTATCAAGAC 282344 |||| | ||||| ||||| |||||| | || | ||| || |||||||||| Sbjct 48305981 CACCAAGGTCAAAGATAAGAACATTCTTCTCACCAACACTGGCAGCCTTCTTATCAAGAC 48305922 Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| |||| ||||||||| || ||||| || ||||||| || ||| ||||| ||||||| Sbjct 48305921 CATATGCAATAGCAGCAGCTGTGGGTTCGTTGATAATTCGCATAACGTTAAGGCCAGCAA 48305862 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | ||| ||||| || || || || | || || || || || || ||||| ||||| | Sbjct 48305861 TAACTCCAGCATCCTTTGTTGCCTGGCGCTGGGAGTCATTGAAGTAGGCAGGTACAGTGA 48305802 Query 282465 TAACGGCAT 282473 ||| |||| Sbjct 48305801 CAACAGCAT 48305793 >seq11 Length=30068910 Score = 125 bits (138), Expect = 5e-23 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || || |||||||| ||||||||||| |||||| |||| ||| |||||| Sbjct 20451603 CCATAAGATAATGCTGCAGCAGTGGGTTCATTAATGATTCTCTGTACATCAAGGCCAGCA 20451544 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 |||||||| |||||||| || || |||| || | |||||| |||||||| ||||||||| Sbjct 20451543 ATTCTTCCCGCATCTTTTGTAGCCTGTCGCTGAGCATCGTTGAAATATGCCGGAACAGTA 20451484 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTA 282520 || || || | | || ||| |||| ||||| || |||| ||||| ||| Sbjct 20451483 ATCACTGCCTTAGAAACAGATTTCCCAAGATAAGATTCAGCAGTTTCCTTCATCTTA 20451427 >seq4 Length=57251647 Score = 120 bits (132), Expect = 2e-21 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 || |||||||| ||||||||||| |||||| |||| ||| |||||||||||||||||| Sbjct 41661055 GCTGCAGCAGTGGGTTCATTAATGATTCTCTGTACATCAAGGCCAGCAATTCTTCCTGCA 41660996 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||||| || || |||| || | ||| || |||||||| ||||||||||| || || Sbjct 41660995 TCTTTTGTAGCCTGTCGCTGAGCATCATTGAAATATGCTGGAACAGTAATCACTGC 41660940 Score = 114 bits (126), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 282245 AAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAA 282304 |||| ||||| |||| || ||| | | | |||||| || || ||||| | ||||||| Sbjct 24398631 AAAACTCCATTATCAATAGTCAAGATACTGACATCAAATGTCCCTCCACCTAGATCAAAA 24398572 Query 282305 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 | ||| | ||| |||| ||| | |||||||||||||| |||| ||| ||||| Sbjct 24398571 ACAAGGATGTTCTTTTCCCCACCTT---TCTTATCAAGACCATAGGCAATAGCCGCAGCT 24398515 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||||||||| || || || |||||| | |||||| || | || ||||| || || Sbjct 24398514 GTTGGTTCATTTATTATCCTAGCAACATTCAAACCAGCTATAATGCCGGCATCCTTGGTT 24398455 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 || || || || | ||| || || || || |||| Sbjct 24398454 GCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAA 24398421 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 86128 AGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCA 86187 || ||||| ||||| ||||||||||| ||| | | ||||| | || |||||| | | Sbjct 41661058 AGTGCTGCAGCAGTGGGTTCATTAATGATTCTCTGTACATCAAGGCCAGCAATTCTTCCT 41660999 Query 86188 GAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCT 86247 | ||| || || |||| ||| || ||||| ||||||||||| |||||||| |||||| Sbjct 41660998 GCATCTTTTGTAGCCTGTCGCTGAGCATCATTGAAATATGCTGGAACAGTAATCACTGCT 41660939 Query 86248 TTATTAATAGGTTT 86261 ||| || || ||| Sbjct 41660938 TTAGAAACAGATTT 41660925 >seq8 Length=40195399 Score = 114 bits (126), Expect = 1e-19 Identities = 206/296 (70%), Gaps = 10/296 (3%) Strand=Plus/Plus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| || |||||||||| |||||| | | | | ||| || || |||| | | Sbjct 2401982 ACATCAAAAGTCCCACCACCCAAATCAAATACA-GCA-ATTAATCCCTC---CTTGTTGT 2402036 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 | || |||||| | || ||||||||| || || ||||| ||||| || | || | Sbjct 2402037 TCAT----ACCATATGAAAGAGCAGCAGCCGTAGGCTCATTGATAATCCTGAGTACCTCC 2402092 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || |||||||||||||| ||||| || ||||| || | || | |||||||||||| ||| Sbjct 2402093 AGTCCAGCAATTCTTCCAGCATCCTTTGTGGCCTGACGCTGCGCATCGTTAAAATAAGCA 2402152 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 ||||| || || || || | | || ||| |||| ||||| ||| || | ||| Sbjct 2402153 GGAACTGTGATGACAGCCTTGGAAACACTTTTACCAAGATAAGACTCTGCCGTCTCCTTC 2402212 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCT-TGGATTCAT 282569 ||||| | | || | || | |||||| ||| || || |||| | |||||| Sbjct 2402213 ATTTTGGTAAGAACAAATGCTCCAATTTGGCTTGGTGAGTACTGCTGTCCATTCAT 2402268 >seq16 Length=21371083 Score = 86.0 bits (94), Expect = 5e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 432291 AAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGTACA 432350 ||||||||||| |||||||| || ||||||||||||||||| ||| | || ||||| ||| Sbjct 20655546 AAAGAAGGTCGAATTAGAGGTAACTTGATGGGAAAGCGTGTTGATTTTTCAGCACGAACA 20655605 Query 432351 GTTATTACTTCTGATCC 432367 || || ||| |||| || Sbjct 20655606 GTCATCACTCCTGACCC 20655622 Score = 86.0 bits (94), Expect = 5e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | |||| |||| | ||||| | ||| |||| ||| | |||||| Sbjct 20657460 GAATTCTTCTTCCATGCTATGGGTGGTAGGGAAGGATTAATTGATACTGCTGTGAAAACT 20657519 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 |||| ||||| |||||||| | ||||| ||| | ||||| |||| || Sbjct 20657520 TCTGAGACTGGGTATATTCAGCGGCGCCTTGTGAAGGCTATGGAAGACATTATGGTCAAA 20657579 Query 435253 TATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCATGTGTTTATGGTGATAAT 435312 ||||||||||| || |||||| | ||| | ||||| || | ||||| || || Sbjct 20657580 TATGATGGTACTGTTAGAAATTCTCTTGGGGATGTTATACAATTCCTCTATGGAGAGGAT 20657639 Query 435313 GGTAT 435317 ||||| Sbjct 20657640 GGTAT 20657644 >seq12 Length=28800575 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || | |||||| |||| ||||||||| ||||||||||| |||||||| ||| Sbjct 13397271 TTCTTGTCCAAACCATATGCAATAGCAGCAGCTGTTGGTTCATTGATAATTCTAGCCACA 13397212 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || | ||||| || | || || || ||||| || ||||| || | ||| || ||||| Sbjct 13397211 TTCAAGCCAGCTATGATGCCAGCGTCCTTAGTTGCCTGTCTCTGAGCATCATTGAAATAA 13397152 Query 282452 GC 282453 || Sbjct 13397151 GC 13397150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738663574197786