Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq40061 610 8e-170 seq14 140 4e-28 seq1 131 2e-25 seq7 82.4 9e-11 >seq40061 Length=156973 Score = 610 bits (676), Expect = 8e-170 Identities = 729/987 (74%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 |||||| | ||| |||| || | ||||| || || | || |||||||| || || Sbjct 1137 TTCTGCAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 1078 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099 ||||| || || | ||| | |||||| ||||| ||||| |||||||| | |||||||| Sbjct 1077 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTCATTATCGCCTTCATTGCTGCTCC 1019 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 || || || || || || || |||||||| || ||||||| || | ||||| ||||| Sbjct 1018 TCCAGTAGATATTGATGGTATTCGTGAACCAGTTTCTGGTTCTCTACTTTATGGAAACAA 959 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 || ||||||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 958 TATTATCTCTGGTGCCATTATTCCGACTTCTGCAGCTATCGGTTTGCATTTTTATCCGAT 899 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 898 ATGGGAAGCGGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 839 Query 181280 CTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCG 181339 | |||||| | | || | | |||||||| ||||| |||||||| || ||| Sbjct 838 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 779 Query 181340 CTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGC 181399 | | |||||||| || ||||| ||||||||| || ||||| || ||||| || |||| Sbjct 778 CCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 719 Query 181400 TGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 181459 ||| ||| | |||| ||| | |||||||| ||||||||| | ||||| | || || Sbjct 718 TGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 659 Query 181460 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCC 181519 |||||||| ||||||| |||| |||| ||||| || || |||||||| || |||||||| Sbjct 658 ATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAACACAACATCCTTATGCATCC 599 Query 181520 CTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGG 181579 || |||||||||||||| || |||||||| || || || || |||||||| ||||| || Sbjct 598 ATTTCACATGTTGGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 539 Query 181580 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 181639 ||| ||||| || ||| | || | || || ||||||| || || || || Sbjct 538 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGCGGG 479 Query 181640 TTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGG 181699 ||||| ||||| ||||| ||||| || || || ||||| || || || ||||| ||||| Sbjct 478 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 419 Query 181700 TCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 181759 || |||||||||||||||||| |||||||| || ||||| | || |||||| | || Sbjct 418 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACATTTCTTCTTGGC 359 Query 181760 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 181819 || ||||||||||| || ||||||||||| || | || | || || ||||| || || Sbjct 358 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 299 Query 181820 CCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACAC 181879 ||| ||||| ||||| |||||||| ||| | | ||| | || || ||||| ||||||| Sbjct 298 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTTATCAACAC 239 Query 181880 CTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 181939 ||||| || | |||| ||||| || || |||||||| ||||| || || || || Sbjct 238 TTGGGCTGATATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGC 179 Query 181940 GCACAACTTCCCGCTTGATCTTGCAGC 181966 ||||||||||| || || || || || Sbjct 178 TCACAACTTCCCTCTAGACCTAGCTGC 152 Score = 506 bits (560), Expect = 3e-138 Identities = 711/989 (72%), Gaps = 8/989 (1%) Strand=Plus/Plus Query 182389 GGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTG 182448 |||| || || || ||||| || |||||||| || | || |||| ||||||| | | Sbjct 33104 GGGACCGTTTCGTTTTTGTAGGCTGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCG 33163 Query 182449 CCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTTGGTACACCCACGGTCTTG 182508 | | || |||||| |||| || ||| ||||||| || ||||| ||||| || | | Sbjct 33164 CTTTAGGAGGTTGGTTTACAGGTACAACTTTTGTAACTTCATGGTATACCCATGGATTGG 33223 Query 182509 CTTCTTCCTATCTTGAAGGTGCTAACTTTCTT-ACGGCAGCTGTCTCGACGCCTGCTGAT 182567 | ||||||| | |||||| || |||||| || || || || || || ||||| || Sbjct 33224 CCAGTTCCTATTTGGAAGGTTGCAA-TTTCTTGACCGCTGCAGTTTCCACTCCTGCGAAT 33282 Query 182568 GCTATGGGTCATTCTCTTCTT-CTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCG 182626 | | | ||||| ||| || ||||| ||||| |||||| | || ||| |||| || Sbjct 33283 AGTTTAGCACATTC-CTTGTTGCTACTATGGGGCCCTGAGGCACAAGGGGATTTTACTCG 33341 Query 182627 GTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCAT 182686 ||||| ||| | || || || |||| ||| || |||||||| |||| |||| || || Sbjct 33342 TTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTCCATGGTGTTTTCGGACTAAT 33401 Query 182687 TGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGAATCA-GACCTTACAAT 182744 ||||| ||| | | ||||| ||||||||||| ||| || ||| ||||||| ||| Sbjct 33402 AGGTTTTATGTTACGTCAATTCGAACTTGCTCGATCTG--TGCAATTGCGACCTTATAAT 33459 Query 182745 GCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTG 182804 || || || || |||| ||| |||||||| || || ||| ||||| || ||||| || Sbjct 33460 GCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTG 33519 Query 182805 GGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCTG 182864 || || || |||||| || ||||| ||||| || || || || || | ||| | Sbjct 33520 GGTCAATCTGGTTGGTTCTTTGCGCCCAGTTTTGGCGTAGCAGCTATATTTCGATTCATC 33579 Query 182865 TTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCT 182924 | ||| | || || || || || ||||| | ||||| || ||||||||||||||||| Sbjct 33580 CTCTTCTTCCAAGGGTTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCC 33639 Query 182925 GGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTG 182984 || || | || | || ||||| | ||||| ||||||| || ||||| ||||| || Sbjct 33640 GGAGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTA 33699 Query 182985 TATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTCCACTCAGGAGGAGGAG 183044 | |||||||| || ||||| ||||| || || | | ||||| | || ||| Sbjct 33700 TTCGAAGATGGTGACGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAG 33759 Query 183045 ACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGC 183104 || ||||| ||||| || || || || |||||||| |||||||| |||||||| ||| | Sbjct 33760 ACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCC 33819 Query 183105 AATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCT 183164 ||||| |||||||| || ||||||||| | ||||| || || | ||| | ||| | | Sbjct 33820 AATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCAGTAACCGGTTTATGGATGAGT 33879 Query 183165 TCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAG 183224 || ||||| | | || || ||||| || || ||||| ||||| || || ||||| Sbjct 33880 GCTCTTGGGGTAGTCGGCCTGGCTCTGAACCTCCGTGCCTATGACTTCGTTTCCCAAGAA 33939 Query 183225 ATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAAT 183284 || | ||||| ||||||||||| || ||||| |||||||| || || ||||| | || Sbjct 33940 ATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATCCTCTTAAAC 33999 Query 183285 GAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCT 183344 ||||| | ||||||||| |||| || ||||| || ||||||||| | || |||||| Sbjct 34000 GAAGGTATTCGTGCTTGGATGGCGGCTCAGGATCAGCCTCATGAAAACCTTATATTCCCT 34059 Query 183345 GAAGAAGTTCTACCTAGAGGTAACGCACT 183373 || || |||||||| | || ||||| || Sbjct 34060 GAGGAGGTTCTACCCCGTGGAAACGCTCT 34088 >seq14 Length=24379743 Score = 140 bits (154), Expect = 4e-28 Identities = 248/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 182745 GCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTG 182804 || ||||| || |||| ||| |||||||| || || | | ||||| || ||||| ||| Sbjct 16929123 GCAATTGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTATATTCCTGATTTATCCATTG 16929182 Query 182805 GGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTC--- 182861 || | || |||||| || ||||| |||||||| || | || || ||| Sbjct 16929183 GGTCGATCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAACTATATTTCTATTCATC 16929242 Query 182862 CTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTT 182921 || || |||| ||| ||| | || ||||| | ||||| || ||||||||||||||| Sbjct 16929243 CTTTTTTTCCAA-AGGTTTT--ATAATTGGACGTTGAACCCATTTCATATGATGGGAGTT 16929299 Query 182922 GCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACC 182981 ||||| || | || | || ||||| | ||||| ||||||| || ||||| |||| Sbjct 16929300 GCTGGAGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATATT 16929359 Query 182982 TTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTCCACTCAGGAGGAG 183041 || | |||||||| || ||||| ||||| | || || | | ||||| | || Sbjct 16929360 TTATTCGAAGATGGTGACGGTGCAAATACATTCCATGCTTTTAACCCAACTCAAGCTGAA 16929419 Query 183042 GAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTT 183100 ||||| ||| ||||| || | | |||||||| |||||||| | |||||| || Sbjct 16929420 GAGACTTATGTAATGGTCACTACTCACTACTTTTGGTCCCAAATCTTTGAGGTTGCTTT 16929478 >seq1 Length=68435666 Score = 131 bits (144), Expect = 2e-25 Identities = 196/277 (71%), Gaps = 1/277 (0%) Strand=Plus/Plus Query 181690 GTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACT 181749 |||| ||||| || ||||||||| ||||| || |||||||| || | || | || | Sbjct 3686462 GTTATTTTGGCCGATTGATCTTCTAATATACTAGTTTCAACAATTCTCATTTCTTACATT 3686521 Query 181750 TCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCA 181809 ||||| | || | ||||||||||| | ||||||||||| || | | | || || | Sbjct 3686522 TCTTCTTGGCTGTTTGGCCTGTAGTAAGTATCTGGTTCACTGCTTTAAGTATTAGTACTA 3686581 Query 181810 TGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTG 181869 || | |||||||| |||| ||||| |||||||| ||| | | ||| | || | ||| Sbjct 3686582 TGACTTTTAACCTAAATGATTTCAA-TTCAACCAATCTGTAGTTGACCGTCAGAGTTGTG 3686640 Query 181870 TCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACG 181929 | |||| || ||| | || | |||| | || ||| || |||||||| ||||| | Sbjct 3686641 TTATCAATACTTGGACTGATATCATCAATTGCGCTAATCTTGGTATGGAAGTAATGCATG 3686700 Query 181930 AGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGC 181966 | || || || ||||||||| | || || || || || Sbjct 3686701 AACGTAATGCTCACAACTTCTCTCTAGACCTAGCTGC 3686737 Score = 107 bits (118), Expect = 2e-18 Identities = 231/344 (67%), Gaps = 1/344 (0%) Strand=Plus/Plus Query 181501 ACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCAC 181560 ||||||| || ||||||| | ||||||||||||| || |||| || | | | Sbjct 30149905 ACAACATCCTCGTGCATCCATCTCACATGTTGGGTGGAGCCGGTGAATATAGCAACTTCT 30149964 Query 181561 TGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAA 181620 | |||||||| || | ||||| |||| || | | | | || || || ||| ||| Sbjct 30149965 TATTCAGTGCTATCAATGGTTCCTTGGCAACCTATACTTTGATCAAGGAAACCACTAAAA 30150024 Query 181621 CTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCG 181680 |||||| || | ||||||| ||| | |||| ||| || || | || || || | Sbjct 30150025 ATGAGTCTACTAATGAAGGTTACAGATTCAGTCAAGTAGACGAAACTCATAATATTGTAG 30150084 Query 181681 CCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTT 181740 ||||| |||| ||||| | || |||| | ||||||| |||||||| || ||| Sbjct 30150085 GTGCCCATGGTTTATTTGGCAGATTTATCTCACGATATGCTAGTTTCAACAATTCTTGTT 30150144 Query 181741 CACT-GCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGC 181799 | | || || || | || || |||| || ||| || |||| ||| | || | | Sbjct 30150145 CCTTAACATTTATTTTTGGCTGCTTGGCTTGCAGTCGGTATCTAGTTACCTGCTTTACGT 30150204 Query 181800 GTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCA 181843 | || || ||| | |||||||| ||||| ||||| | |||||| Sbjct 30150205 ATCAGTACTATGACTTTTAACCTAAATGGTTTCAATTCCAACCA 30150248 >seq7 Length=43454766 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 183237 GAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGT 183296 ||||||||||| || ||||| ||||| | || || ||||| | ||||||| | ||| Sbjct 40226800 GAAGATCCTGAATTTGAGACTTTCTATATCAAAAATATCCTCTTAAATGAAGATATTCGT 40226859 Query 183297 GCTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTA 183356 |||||| |||| || |||||||| ||| |||| | || |||||||| | |||||| Sbjct 40226860 GCTTGGATGGCGGCTCAAGATCAACCTCATAAAAATCTTATATTCCCTGAGAAGGTTCTA 40226919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614309822554080