Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 1e-12 seq6 87.8 1e-12 >seq7 Length=43454766 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTG--GCTACATTAAAAGGAACACCCAGAC 118603 |||||||||||| ||||||| || || | | || | ||||| || ||||| |||| Sbjct 17739031 TGAGCAATCATGCATGTCAA--AAGTGAATACGACGCAATGTTAAATGGCACACCAAGAC 17738974 Query 118604 CCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACT 118663 |||||||||| || | ||||||| |||||| || ||||| || || | |||||||||| Sbjct 17738973 CCATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCGCCATTCTCCACATAAAACT 17738914 Query 118664 G 118664 | Sbjct 17738913 G 17738913 >seq6 Length=44357769 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTG--GCTACATTAAAAGGAACACCCAGAC 118603 |||||||||||| ||||||| || || | | || | ||||| || ||||| |||| Sbjct 2917121 TGAGCAATCATGCATGTCAA--AAGTGAATACGATGCAATGTTAAATGGCACACCAAGAC 2917178 Query 118604 CCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACT 118663 |||||||||| || | ||||||| |||||| || ||||| || || | |||||||||| Sbjct 2917179 CCATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCGCCATTCTCCACATAAAACT 2917238 Query 118664 G 118664 | Sbjct 2917239 G 2917239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414274434422404