Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 9e-15 >seq10 Length=31890735 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || |||||||| || || |||| ||||| ||| | Sbjct 15231588 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACCATCACTCTTGAGGTCGAGAGCTCG 15231529 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| |||| || || ||||| ||||| ||||| |||| ||| | Sbjct 15231528 GACACGATTGACAAC--GTGAAGGCTAAAATTCAGGACAAGGAAGGCATTCCTCCGGACC 15231471 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || ||||| ||||| ||| |||| || | |||| | || | ||||| | Sbjct 15231470 AGCAGCGTTTGATCTTTGCTGGAAAGCAACTGGAGGATGGCCGCACCCTGGCGGATTATA 15231411 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||||| ||| ||| | || ||||| | || | ||||| ||| Sbjct 15231410 ACATCCAAAAGGAGTCTACTCTTCACTTGGTGCTCCGCCTCCGTGGTGGC 15231361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355688652518547