Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq232 86.0 5e-12 seq36 86.0 5e-12 >seq232 Length=898664 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||||| || ||||| ||||| ||||||||||||||||| || | Sbjct 726481 ACTTGAGCAATCATGCATGTCAAAAGTGAATACGACGCAATGTTAAATGGCACACCAAGA 726540 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| || || || | ||| |||| ||| || || |||| |||| |||||||| Sbjct 726541 CCCATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCGCCATTTTCCACATAAAAC 726600 Query 101876 TG 101877 || Sbjct 726601 TG 726602 >seq36 Length=1992845 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||||| || ||||| ||||| ||||||||||||||||| || | Sbjct 1116133 ACTTGAGCAATCATGCATGTCAAAAGTGAATACGATGCAATGTTAAATGGCACACCAAGA 1116074 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| || || || | ||| |||| ||| || || |||| |||| |||||||| Sbjct 1116073 CCCATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCGCCATTCTCCACATAAAAC 1116014 Query 101876 TG 101877 || Sbjct 1116013 TG 1116012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361133400047756