Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26]
26,756 sequences; 1,402,725,009 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq26 141 8e-29
seq297 138 1e-27
seq167 138 1e-27
seq4 136 3e-27
seq281 134 1e-26
seq328 122 8e-23
seq630 118 9e-22
seq155 114 1e-20
seq1259 111 1e-19
seq782 86.0 5e-12
>seq26
Length=2273700
Score = 141 bits (156), Expect = 8e-29
Identities = 158/210 (75%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||| || |||||||||||||| || || |||||| ||||||
Sbjct 442764 ACCAAATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCTGCCAGCGTGCGCCCATCCTCC 442705
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||||| ||||| ||||||| ||||||||||| || || ||||||||||| ||
Sbjct 442704 AGCTGTTA-CCAGCAAAGATGAGCCGCTGCTGATCTGGTGGGATGCCCTCCTTATCCTGG 442646
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | || | |||||| | |||||| ||||||| ||| | || ||
Sbjct 442645 ATTTTAGCCTTTACATTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTGATGGTCTTT 442586
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || |||||||| |||||||||
Sbjct 442585 CCAGTGAGGGTCTTTACAAAGATCTGCATG 442556
Score = 134 bits (148), Expect = 1e-26
Identities = 158/210 (75%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||| || ||| |||||||||| || || |||||| ||||||
Sbjct 453216 ACCAAATGAAGAGTAGATTCCTTT-GAATGTTGTAGTCTGCCAGTGTGCGCCCATCCTCC 453158
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||||| ||||| ||||||||||||||||||| || || ||||||||||| ||
Sbjct 453157 AGCTGTTA-CCAGCAAAGATGAGACGCTGCTGATCTGGTGGGATGCCCTCCTTATCCTGG 453099
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || |||||||| | |||||| ||||| | ||| | || ||
Sbjct 453098 ATCTTAGCCTTTACATTGTCAACGGTGTCGGAGCTCTCTACCTCAAGGGTGATGGTCTT- 453040
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| ||||| || ||||| |||||||||
Sbjct 453039 CCGGTAAGAGTCTTCACAAAGATCTGCATG 453010
Score = 127 bits (140), Expect = 2e-24
Identities = 155/210 (74%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||| || ||| |||||||||| || || |||||| ||||||
Sbjct 490729 ACCAAATGAAGAGTAGATTCCTTT-GAATGTTGTAGTCCGCCAACGTGCGCCCATCCTCC 490671
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| |||||| ||||| ||||||||||||||||||| || || ||||||||||| ||
Sbjct 490670 AACTGTTTACCAGCAAAGATGAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGG 490611
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | |||||| | |||||| ||||| | ||| | || ||
Sbjct 490610 ATCTTAGCCTTTACATTGTCAATGGTGTCAGAGCTCTCTACCTCAAGGGTGATGGTCTTT 490551
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || ||||| |||||||||
Sbjct 490550 CCAGTGAGGGTCTTCACAAAGATCTGCATG 490521
Score = 120 bits (132), Expect = 3e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || |||||||| ||||||||||| || || ||||| |||||| |
Sbjct 441581 CAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAGTCAGCCAGTGTGCGACCATCCTCAA 441522
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||||||| || ||| | || || | ||| || || ||||| ||||||||||||||| |
Sbjct 441521 GCTGTTTGCCGGCGAAAATAAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGA 441462
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| || || | ||| || || || | ||| | || ||||
Sbjct 441461 TCTTGGCCTTCACATTATCGATTGTATCAGAGCTTTCAACTTCAAGGGTGATGGTCTTGC 441402
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| |||||||| || ||||| ||||||||
Sbjct 441401 CAGTCAGAGTCTTAACAAAGATCTGCAT 441374
Score = 113 bits (124), Expect = 4e-20
Identities = 151/209 (72%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || || || || |||||||| ||||| || || || ||||||
Sbjct 442537 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAATGTACGGCCATCCTCA 442478
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| ||||||| | |||||| || ||||| || ||||||||||||
Sbjct 442477 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCTTGG 442418
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|||||| |||||| | || | || || | |||||| || || | ||| | || ||
Sbjct 442417 ATTTTTGCTTTAACATTGTCAATTGTATCAGAGCTCTCAACTTCTAGGGTGATGGTCTTT 442358
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || | |||| || ||||||||
Sbjct 442357 CCAGTAAGGG--TTTAACAATATCTGCAT 442331
Score = 102 bits (112), Expect = 7e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600
|| || ||||| || |||||||| || ||| | || ||| |||||| ||||| || ||
Sbjct 490945 GTGGATTCTTTCTGGATGTTGTAGTCTGCT-AGGGTACGCCCATCCTCAAGCTGCTTACC 490887
Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660
||| | ||||| | |||||| || ||||| || || |||||||| || || ||
Sbjct 490886 AGCAAAAATGAGCCTCTGCTGGTCAGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCCTT 490827
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | |||| |||||||| |||||| || || | || | || || || || || ||
Sbjct 490826 GACATTATCGATGGTGTCCGAGCTCTCCACTTCCAAAGTGATGGTCTTCCCAGTGAGGGT 490767
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 490766 CTTCACAAAAATCTGCAT 490749
Score = 93.3 bits (102), Expect = 4e-14
Identities = 91/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || || || || |||||||||||||| || || || ||||||
Sbjct 490502 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAATCAGCCAATGTTCGGCCATCCTCA 490443
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| || ||||| ||||||| | |||||| || ||||| ||||||||||||||
Sbjct 490442 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTC-GGAGGGATGCCCTCCTTGTC 490388
>seq297
Length=752846
Score = 138 bits (152), Expect = 1e-27
Identities = 160/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||||||| | ||||| || || |||||||||||||| || ||||| |||
Sbjct 218144 CATCACCAAGTGAAG-GTAGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTCCATC 218086
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| || || |||||||| |||| ||||||||||| || ||||| || || ||||||||
Sbjct 218085 CTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGAGG-ATTCCTTCCTTGTC 218027
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||| ||| || || | || | |||||| | |||||| ||||| | || | |||
Sbjct 218026 CTGAATCTTTGCCTTGACATTATCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATCGT 217967
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||||||| || ||||| ||||||||
Sbjct 217966 CTTCCCTGTCAGAGTCTTGACAAAGATCTGCAT 217934
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCT 118570
|| || | ||||| | |||||||| | || ||||||||||| ||||||||||| |||
Sbjct 217932 CCACCTCTTAATCGGAGGACCAAGTGAAGAGTGGACTCTTTTTGGATGTTGTAATCTGCT 217873
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||||| |||||| ||||| || ||||| | || || ||||||||||| || ||
Sbjct 217872 AAT-GTGCGACCATCCTCAAGCTGCTTCCCAGCAAATATCAGGCGCTGCTGATCAGGTGG 217814
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
||||||||||| || ||| ||| ||| || | || | |||||| | |||||| ||
Sbjct 217813 GATGCCCTCCTTATCCTGAATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAAC 217754
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| | ||| | || || || || || || || | || |||||||||
Sbjct 217753 CTCAAGGGTGATAGTCTTCCCTGTAAGGGTCTTGATGAAGATCTGCATG 217705
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||| ||||||||||| || | |||||| |||||| ||||| || ||
Sbjct 218355 GTTGATTCTTTCTGAATGTTGTAGTCTGCAAGAGTGCGACCATCCTCCAGCTGCTTCCCG 218296
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| ||||||| ||||||||||| || ||||||||||||||||| ||| ||| ||
Sbjct 218295 GCAAAGATGAGGCGCTGCTGATCAGGGGGTATGCCCTCCTTGTCCTGAATCTTTGTCTTC 218236
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||| | ||||| ||||| | ||| | || || || || | |||
Sbjct 218235 ACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTAATTGTCTTCCCTGTTAAAGTC 218176
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 218175 TTAACAAAGATCTGCAT 218159
Score = 113 bits (124), Expect = 4e-20
Identities = 151/209 (72%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| ||||| ||||| || || || ||||| ||||||
Sbjct 217687 ACCAGGTGCAAGGTCGACTCCTTTTGGATGTTATAGTCTGCCAAGGTGCGACCATCCTCC 217628
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| || ||||| |||| || ||||||||||| || || || ||||| ||||| |
Sbjct 217627 AACTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGG-ATCCCCTCTTTGTCCTGA 217569
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | || | |||||| | |||||| ||||| | ||| | || |||
Sbjct 217568 ATCTTAGCTTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTCTTG 217509
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||| ||||||||
Sbjct 217508 CCAGTAAGGGTCTTCACAAAGATCTGCAT 217480
>seq167
Length=1102902
Score = 138 bits (152), Expect = 1e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| |||| |||||||||||||| ||||| |||||| | ||||| |||||
Sbjct 191367 CACCAGATGGAGAGTAGACTCTTTTTGGATGTTATAATCGGCGAGGGTGCGACCGTCCTC 191426
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| || ||||| ||| |||| ||||||||||| || || || || || ||||| |||
Sbjct 191427 AAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATACCTTCCTTATCTTG 191486
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||||| |||||||||||| | ||| | || ||
Sbjct 191487 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATGGTCTT 191546
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||||| || || || || || ||||||||| ||
Sbjct 191547 GCCGGTGAGGGTCTTGACGAATATCTGCATGCCT 191580
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| ||||||||||| |||||| | ||||| || || |||||
Sbjct 191601 GTGGAGGGTGGACTCCTTTTGAATGTTATAATCGGCGAGGGTGCGGCCGTCTTCCAGCTG 191660
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| ||||||||||| || || || |||||||| || || || ||
Sbjct 191661 CTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCTTTATCCTGGATCTT 191720
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| ||||||||| | || | || ||||||||
Sbjct 191721 GGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 191780
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 191781 GAGGGTCTTGACGAAGATCTGCAT 191804
>seq4
Length=3455462
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | |||||||| ||||| ||||| ||||| || ||||| ||||||
Sbjct 2201061 CACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAATCCGCCAGGGTGCGGCCATCCTC 2201120
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| || |||||||| |||| | ||||||||| || ||||| ||||| ||||||||
Sbjct 2201121 CAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTG 2201180
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | || | ||||||| |||||||||||| | || | || ||
Sbjct 2201181 AATTTTAGCCTTCACGTTGTCAATCGTGTCCGAGCTCTCGACCTCAAGAGTGATGGTCTT 2201240
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||| ||||||||
Sbjct 2201241 CCCAGTGAGGGTCTTGACAAAGATCTGCAT 2201270
Score = 107 bits (118), Expect = 2e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 118552 TTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGA 118611
||||||| ||||| ||| || |||||| |||||||||||| || || || |||| |
Sbjct 2201537 TTTGAATATTGTAGTCGGCCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCA 2201596
Query 118612 GACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGA 118671
||||||||| || || || |||||||||||||| || ||| || || | || |
Sbjct 2201597 AACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCAA 2201656
Query 118672 CGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAA 118731
||| |||| | ||| ||||| | ||| | || ||||| || || || || || || |
Sbjct 2201657 TGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGA 2201716
Query 118732 TCTGCAT 118738
|||||||
Sbjct 2201717 TCTGCAT 2201723
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| |||||| || || || || || ||||| || ||||| |||||| || ||
Sbjct 2201296 TGGAGTGTAGATTCCTTCTGGATATTATAATCAGCCAGGGTGCGGCCATCCTCCAGTTGC 2201355
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || || |||| || | |||||| || || || || |||||||||||| || ||
Sbjct 2201356 TTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG-GGAATTCCCTCCTTGTCTTGGATCTTA 2201414
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | || | |||||| | |||||||||||| | ||| | || || || ||
Sbjct 2201415 GCCTTGACATTATCAATGGTGTCAGAGCTCTCGACCTCCAGGGTGATGGTCTT-CCCGTG 2201473
Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || |||||||||
Sbjct 2201474 AGGGTCTTCACGAAGATCTGCATG 2201497
>seq281
Length=803475
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||||||||| || ||||||||| | ||| || ||||| |||||
Sbjct 254930 GTGGAGGGTGGACTCTTTTTGGATATTGTAATCGGCGAGAGTCCGGCCGTCCTCAAGCTG 254871
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| ||||| ||||| || || ||||||||||||||||| || ||
Sbjct 254870 CTTGCCGGCGAAGATAAGACGTTGCTGGTCCGGGGGTATGCCCTCCTTGTCCTGGATCTT 254811
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| ||||||| | ||||||||||| ||| | || ||||||||
Sbjct 254810 GGCCTTAACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 254751
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 254750 GAGGGTCTTGACGAAGATCTGCAT 254727
Score = 116 bits (128), Expect = 3e-21
Identities = 149/204 (73%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || || ||||||||| | ||| || ||||| ||||||
Sbjct 255156 TGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCAAGAGTCCGGCCGTCCTCAAGCTGT 255097
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
||||| ||| |||| || | |||||| || || || |||||||||||||| || ||
Sbjct 255096 TTTCCGGCGAAGATTAGCCTCTGCTGGTCCGGGGG-ATGCCCTCCTTGTCCTGGATCTTG 255038
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | |||| ||||||| | ||||||||||| ||| | || ||||||||
Sbjct 255037 GCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 254978
Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || |||||||||
Sbjct 254977 AGGGTCTTGACGAAGATCTGCATG 254954
>seq328
Length=735707
Score = 122 bits (134), Expect = 8e-23
Identities = 150/204 (74%), Gaps = 1/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || || ||||| ||| | ||||| |||||| |||||
Sbjct 4858 GTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGCGAGGGTGCGGCCATCCTCTAGCTG 4917
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| |||| || ||||||||||| || || ||||| |||||||| || ||
Sbjct 4918 CTTTCCGGCGAAGATAAGGCGCTGCTGATCCGGTGGGATGCCTTCCTTGTCCTGGATCTT 4977
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| | ||||||||||| ||| | ||| ||||||||
Sbjct 4978 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 5037
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 5038 GAGGGTCTTGAC-AAGATCTGCAT 5060
>seq630
Length=471042
Score = 118 bits (130), Expect = 9e-22
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||||||| | ||||| |||||||||||
Sbjct 35896 GTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTG 35955
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| ||||||| |||||||| || || || |||||||||||||| || ||
Sbjct 35956 CTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTT 36015
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | | ||| |||||| ||| | || || || ||
Sbjct 36016 GGACTTGACGTTGTCGATGGTGTCGGAGGACTCTGCCTCGAGGGTAATAGTCTTCCCCGT 36075
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || |||||||||
Sbjct 36076 GAGGGTCTTCACGAAGATCTGCATG 36100
>seq155
Length=1009872
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || ||||||||||| ||| | || || ||||||||||||
Sbjct 940205 GTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTCCGGCCATCCTCGAGCTG 940264
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| ||||||| ||||||||||| || || |||||||||||||| || ||
Sbjct 940265 CTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTT 940324
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| | ||| ||||| | ||| | || || || ||
Sbjct 940325 GGCCTTGACGTTCTCGATTGTGTCGGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGT 940384
Query 118715 CAGAGTTTTTACAAAAATCTGCATGG 118740
|| || || || || ||||||||||
Sbjct 940385 GAGGGTCTTCACGAAGATCTGCATGG 940410
>seq1259
Length=190105
Score = 111 bits (122), Expect = 1e-19
Identities = 148/203 (73%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || ||||| || ||| | ||||| || |||||||||
Sbjct 49446 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGT 49387
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| |||||||| || || || |||||||| ||||| || ||
Sbjct 49386 TT-CCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG-ATGCCCTCTTTGTCCTGGATCTTG 49329
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | |||| ||||||| | ||||||||||| ||| | || ||||| |||
Sbjct 49328 GCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTC 49269
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || ||||||||
Sbjct 49268 AGAGTCTTCACGAAGATCTGCAT 49246
>seq782
Length=366579
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|| || |||| || | ||| ||||||||||||||||||||||| || || || |
Sbjct 138083 CTTAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTGTAATCAGCCAAGGTTCGGCCA 138024
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || | ||||||||||||| | || | | || ||||| || ||||| |||||||||
Sbjct 138023 TCTTCCAACTGTTTTCCAGCGAAAATCAATCTTTGTTGATCTGGGGGTATACCCTCCTTG 137964
Query 118644 TC 118645
||
Sbjct 137963 TC 137962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433688932787152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |