Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq469 82.4 6e-11 >seq469 Length=520437 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| |||| || || | |||| ||| || ||||||||||| ||||||||||||||||| Sbjct 233394 TCCACCCCTGAGCCTCAAAACCAGGTGGAGAGTTGATTCTTTCTGAATGTTGTAGTCGGC 233335 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| || ||| ||||| || || || ||| | || || || || ||||| || Sbjct 233334 TAAGGTTCGACCATCCTCCAACTGCTTCCCTGCAAATATTAGCCTCTGCTGATCTGGAGG 233275 Query 18218 CACGCCTTCCTTATC 18232 | || |||||||| Sbjct 233274 TATACCCTCCTTATC 233260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379220300189220