Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq94 98.7 9e-16 >seq94 Length=1461416 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 38400 TTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTC 38459 ||||||| |||||| || |||||||||||||| ||||| ||||| ||||||| || Sbjct 1163668 TTGAGGCCTTGGAGTGCCTGCGTTAAATAATGTTGGAGAAGCATGAGTGAACCAGCGTTG 1163609 Query 38460 CGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGA 38519 |||| ||| ||||||| | ||| ||| |||||| ||| || || | || Sbjct 1163608 AGACATCAAATGATATGTTCTGAGAACAGAATCAATATCATTCTTGTGGATTCCAACAGC 1163549 Query 38520 TACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTT 38558 || ||||| ||||| |||||||| ||||||| || ||| Sbjct 1163548 AACTCTCATCAGCATGTGTTGTGGCCTTTCTACTACTTT 1163510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468368101880640