Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1259 156 1e-32 seq328 154 3e-32 seq167 145 2e-29 seq281 141 2e-28 seq155 132 1e-25 seq4 125 2e-23 seq297 123 6e-23 seq26 116 9e-21 seq62 89.7 1e-12 seq13 89.7 1e-12 >seq1259 Length=190105 Score = 156 bits (172), Expect = 1e-32 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || ||||| | ||| || || ||||| ||||||||||| Sbjct 49471 TCCACCGCGGAGGCGGAGGACTAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGC 49412 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||||| |||||||| | ||||| || |||||||| || ||||| || | || Sbjct 49411 GAGGGTGCGGCCGTCTTCGAGCTGTTT-CCGGCGAAGATGAGGCGCTGCTG-GTCCGGGG 49354 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || ||||| |||||||| || || || ||||| || || | || || || || Sbjct 49353 GATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 49294 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 49293 CTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 49246 >seq328 Length=735707 Score = 154 bits (170), Expect = 3e-32 Identities = 171/227 (75%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || |||||||| ||||||||| Sbjct 4835 CCGCCGCGGAGGCGGAGAACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGCG 4894 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || |||| || ||||| |||||||| || ||||| ||| |||| Sbjct 4895 AGGGTGCGGCCATCCTCTAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGATCCGGTGGG 4954 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | || || || || Sbjct 4955 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 5014 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct 5015 TCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGAC-AAGATCTGCAT 5060 >seq167 Length=1102902 Score = 145 bits (160), Expect = 2e-29 Identities = 172/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || || || || | ||| || ||||| || ||||| | Sbjct 191574 CATG-CCTCCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTTTGAATGTTATAAT 191632 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| ||||| |||||||| | || || || ||||||||||||||||| || Sbjct 191633 CGGCGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCG 191692 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || |||||||||||||| || || || ||||| || || | || ||| | Sbjct 191693 GGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACT 191752 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 191753 CGACCTCCAAAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 191804 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || ||||| | || ||||||||||| ||||| |||||| Sbjct 191350 CCTCCACGGAGGCGGAGCACCAGATGGAGAGTAGACTCTTTTTGGATGTTATAATCGGCG 191409 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||| ||||| ||||||||||||||||| || || Sbjct 191410 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 191469 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||| || || || || || ||||| || || | || |||| || Sbjct 191470 ATACCTTCCTTATCTTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGCTC---TCG 191526 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| ||||| || |||||||||||||||||||| Sbjct 191527 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAATATCTGCAT 191576 Score = 105 bits (116), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || ||||| | ||| || || || |||||||||||||| Sbjct 191123 CCACCGCGAAGACGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTATAGTCGGCA 191182 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || || |||||||| | ||| || || Sbjct 191183 AGGGTCCTGCCGTCCTCAAGCTGCTTCCCGGC-AAGATCAGCCTCTGCTGGTCCGGCGGA 191241 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||||||||| ||||| || || || || || | ||| |||| || Sbjct 191242 ATCCCCTCCTTATCCTGGATCTTCGCCTTGACATTATCAATGGTATCCGAGCTC---TCC 191298 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || || ||||| || || |||||||| Sbjct 191299 ACCTCAAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACAAAGATCTGCAT 191348 >seq281 Length=803475 Score = 141 bits (156), Expect = 2e-28 Identities = 174/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || ||||| || | ||| |||||||||||||| || | Sbjct 254957 CATG-CCACCGCGGAGACGGAGGACGAGGTGGAGGGTGGACTCTTTTTGGATATTGTAAT 254899 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| || || ||||| || | || || || |||||||| ||||| || || | Sbjct 254898 CGGCGAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGG---T 254842 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || || || || |||||||| || || || ||||| || || | || | Sbjct 254841 CCGGGGGTATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGG 254782 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 254781 ACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 254727 Score = 123 bits (136), Expect = 6e-23 Identities = 143/190 (75%), Gaps = 7/190 (4%) Strand=Plus/Minus Query 288287 TTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCA 288346 |||||||||| || || ||||| || | |||||| || | ||| || || |||||||||| Sbjct 256009 TTTGGATATTGTAATCCGCGAGAGTCC-TCCGTCCTCCAGTTGCTTCCCGGCGAAGATCA 255951 Query 288347 GACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTA 288406 | | ||| || || || || || ||||||||||| ||||| |||||||| || | Sbjct 255950 GCCTCTGCTGGTCCGGCGGAATCCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAA 255891 Query 288407 TAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||| || |||| || || ||||| ||||||||||| || || |||||||| |||| Sbjct 255890 TAGTGTCCGAGCTC---TCCACCTCGAGGGTGATCGTCTTACCCGTGAGAGTCTTCACGA 255834 Query 288464 ATATCTGCAT 288473 | || ||||| Sbjct 255833 AGATTTGCAT 255824 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || ||||| || || || ||||| || | |||||||| |||||| Sbjct 255144 TCCTTCTGGATATTGTAATCGGCAAGAGTCCGGCCGTCCTCAAGCTGTTTTCCGGCGAAG 255085 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || || || |||||||| || || || ||||| Sbjct 255084 ATTAGCCTCTGCTG-GTCCGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 255026 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| ||||| || ||||||||| Sbjct 255025 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 254966 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 254965 AAGATCTGCAT 254955 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||||||||||||||| || | |||||||| | ||||| || |||||| Sbjct 255786 TCCTTCTGGATATTATAGTCGGCGAGGGTCCTGCCGTCTTCAAGCTGTTTCCCGGCGAAG 255727 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| || || || |||||||| ||||| || ||||| Sbjct 255726 ATAAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 255667 Query 288403 TCTAT 288407 || || Sbjct 255666 TCAAT 255662 >seq155 Length=1009872 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | ||| ||||| || | ||| || || || || || ||||||||| Sbjct 940182 CCGCCGCGGAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 940241 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || || || | || ||||| |||||||| || ||||| || |||| Sbjct 940242 AGGGTCCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTG---ATCTGGG 940298 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| || || || ||||| || || | ||| || || Sbjct 940299 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATTGTGTCGGAAGACTCC 940358 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| |||||||| || || ||||| ||||| |||||||| Sbjct 940359 ACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 940408 >seq4 Length=3455462 Score = 125 bits (138), Expect = 2e-23 Identities = 171/235 (73%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || || |||| ||| ||| ||| | ||||| |||| Sbjct 2201494 CATG-CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGATTCCTTT-GAATATTGTAGT 2201551 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || ||||| || || || | || || || || ||||||| |||||| || | Sbjct 2201552 CGGCCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGG---T 2201608 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || |||||||| || || || ||||| || || | ||| | Sbjct 2201609 CTGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAGG 2201668 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 2201669 ACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 2201723 Score = 105 bits (116), Expect = 2e-17 Identities = 165/232 (71%), Gaps = 12/232 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | || ||| || ||||||||||| || || Sbjct 2201272 CCACCACGAAGGCGGAGGACGAGATGGAGTGTAGATTCCTTCTGGATATTATAATCAGCC 2201331 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||| || || || |||||||| | ||| || || ||| Sbjct 2201332 AGGGTGCGGCCATCCTCCAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTG---GTCCGGG 2201388 Query 288367 --ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATT 288421 ||||| || || || ||||| || || || || || || || | || |||| | Sbjct 2201389 GAATTCCCTCCTTGTCTTGGATCTTAGCCTTGACATTATCAATGGTGTCAGAGCTC---T 2201445 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| |||||||| || || ||||| ||||| |||||||| Sbjct 2201446 CGACCTCCAGGGTGATGGTCTTCCC-GTGAGGGTCTTCACGAAGATCTGCAT 2201496 >seq297 Length=752846 Score = 123 bits (136), Expect = 6e-23 Identities = 148/198 (75%), Gaps = 11/198 (6%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || || || || ||||||||||| || || | ||| ||||| || || Sbjct 218124 TTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTCCATCCTCAAGTTGCTTTCCAGCAAA 218065 Query 288342 GATCAGACGCTGTTGAGAATCTGG--GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||| |||||||| || ||||| ||||||||| || ||||| || || || || || Sbjct 218064 GATAAGACGCTGCTGG---TCTGGAGGATTCCTTCCTTGTCCTGAATCTTTGCCTTGACA 218008 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || || | |||||||||||||| ||||||||| Sbjct 218007 TTATCAATGGTGTCGGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCTGTCAGAGTC 217951 Query 288457 TTGACGAATATCTGCATT 288474 ||||| || ||||||||| Sbjct 217950 TTGACAAAGATCTGCATT 217933 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || || || || | ||||| || || || | || || || || || Sbjct 217896 TCTTTTTGGATGTTGTAATCTGCTAATGTGCGACCATCCTCAAGCTGCTTCCCAGCAAAT 217837 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| ||| | |||||| || || |||||||| || || |||||||| || Sbjct 217836 ATCAGGCGCTGCTGATCAGGTGGGATGCCCTCCTTATCCTGAATCTTTGCTTTCACATTA 217777 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || || ||||| |||||||| || || |||||| Sbjct 217776 TCAATGGTGTCTGAGCTC---TCAACCTCAAGGGTGATAGTCTTCCCTGTAAGGGTCTTG 217720 Query 288460 ACGAATATCTGCAT 288473 | ||| |||||||| Sbjct 217719 ATGAAGATCTGCAT 217706 >seq26 Length=2273700 Score = 116 bits (128), Expect = 9e-21 Identities = 171/238 (72%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||||| || || ||||| | ||| ||||| || || || |||| Sbjct 441604 CATG-CCACCCCTGAGTCGGAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAGT 441546 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || || || | ||||| || ||||| || || | |||||| | Sbjct 441545 CAGCCAGTGTGCGACCATCCTCAAGCTGTTTGCCGGCGAAAATAAGCCTCTGTTGG---T 441489 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 |||| ||| || || || || ||||| || || ||||| || || || | ||| || Sbjct 441488 CTGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTATCGATTGTATCAGAGC 441429 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| ||||| || ||||| ||||| || ||||||||||| || || |||||||| Sbjct 441428 T---TTCAACTTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACAAAGATCTGCAT 441374 Score = 114 bits (126), Expect = 3e-20 Identities = 165/230 (72%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||||| || ||| ||||| || || ||||| || Sbjct 442782 CCACCACGAAGGCGGAGGACCAAATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCTGCC 442723 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | |||| || || ||||| || ||||| ||| |||| Sbjct 442722 AGCGTGCGCCCATCCTCCAGCTGTTA-CCAGCAAAGATGAGCCGCTGCTGATCTGGTGGG 442664 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || |||||||||||||| || || || || || || | || |||| ||| Sbjct 442663 ATGCCCTCCTTATCCTGGATTTTAGCCTTTACATTGTCAATGGTGTCAGAGCTC---TCT 442607 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||| || || |||||||| Sbjct 442606 ACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 442557 Score = 111 bits (122), Expect = 4e-19 Identities = 164/230 (71%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||||| || ||| ||| | || || ||||| || Sbjct 490747 CCACCACGAAGGCGGAGGACCAAATGAAGAGTAGATTCCTTT-GAATGTTGTAGTCCGCC 490689 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||| || || || || ||||| || || ||||| |||||||| ||| |||| Sbjct 490688 AACGTGCGCCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGCTGATCCGGTGGG 490629 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||||||||| || || || || || || || | || |||| ||| Sbjct 490628 ATGCCCTCCTTATCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCAGAGCTC---TCT 490572 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || ||||| || || |||||||| Sbjct 490571 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 490522 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/230 (71%), Gaps = 9/230 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||||| || ||| ||| | || || ||||| || Sbjct 453234 CCACCACGAAGGCGGAGGACCAAATGAAGAGTAGATTCCTTT-GAATGTTGTAGTCTGCC 453176 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | |||| || || ||||| |||||||| ||| |||| Sbjct 453175 AGTGTGCGCCCATCCTCCAGCTGTTA-CCAGCAAAGATGAGACGCTGCTGATCTGGTGGG 453117 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||||||||| || || || || || || | | || |||| ||| Sbjct 453116 ATGCCCTCCTTATCCTGGATCTTAGCCTTTACATTGTCAACGGTGTCGGAGCTC---TCT 453060 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| |||||||| || || |||||||| Sbjct 453059 ACCTCAAGGGTGATGGTCTT-CCGGTAAGAGTCTTCACAAAGATCTGCAT 453011 Score = 96.9 bits (106), Expect = 8e-15 Identities = 163/232 (70%), Gaps = 12/232 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||||| ||| || || |||||||||||||| || Sbjct 443008 CCACCACGAAGGCGGAGGACAAGATGAAGAGTGGACTCCTTCTGGATATTATAGTCCGCC 442949 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC--GCTGTTGAGAATCTG 288364 | || || || || || | || ||||| || || || || | |||| | || | | Sbjct 442948 AAAGTACGCCCATCCTCAAGCTGCTTTCCAGC-AAAATAAGTCTTGCTGATCAGGA---G 442893 Query 288365 GGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATT 288421 | || ||||| ||||| ||||| || || || || || || || | || |||| | Sbjct 442892 GAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCGATGGTGTCCGAGCTC---T 442836 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| || ||||| |||||||| || || ||||| || || |||||||| Sbjct 442835 CCACTTCTAGAGTGATGGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 442784 >seq62 Length=1642893 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || ||||| || || || || | ||||| || || |||||||| |||| Sbjct 1300573 CCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGCGTCATCG 1300632 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||| ||||| |||||||||||||| Sbjct 1300633 TCTTCCCGGTCAGCGTCTTCACGAATATCTGCAT 1300666 >seq13 Length=2877802 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||||||||||||||| || ||||| ||||| || || | || || || || ||| Sbjct 518570 CCTTCTTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCG 518629 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || ||||| || |||||||| Sbjct 518630 AGGGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCAT 518673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179250001200568