Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1707 89.7 4e-13 >seq1707 Length=176913 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/120 (78%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 111179 TGGACTACGCGGCGTCCAAGGGCGCCGTGGCGACGTTCACGAAAGGTCTGGCGCGCCAGG 111238 |||||||| ||||| ||||||| ||| | | | |||||||| || ||||||| ||| Sbjct 59159 TGGACTACACGGCGACCAAGGGGGCCATCGTGGGGTTCACGAGGGG-CTGGCGCTGCAGC 59217 Query 111239 TAGCGTCGCGAGGG-ATAAGAGTCAATGGCGTAGCGCCCGGACCGGTGTGGACACCGCTG 111297 | ||| || |||| ||| ||||||| || || ||||| || ||||||||||| |||||| Sbjct 59218 TGGCGG-GCAAGGGGATACGAGTCAACGGTGTGGCGCCGGGGCCGGTGTGGACGCCGCTG 59276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381648308184864