Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq297 84.2 2e-11 >seq297 Length=752846 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||| |||| || || || ||||||||||| || | | | || || Sbjct 218140 ACCAAGTGAAGG-TAGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTCCATCCTCA 218082 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA--ATTCCTTCCTTGTCAC 15085 | ||| || ||||| | || | |||||| ||||| |||| |||||||||||||| Sbjct 218081 AGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTC---TGGAGGATTCCTTCCTTGTCCT 218025 Query 15086 AAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||||| || ||| | || || || ||| | || || || || || || || Sbjct 218024 GAATCTTTGCCTTG-ACATTATCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATCGTC 217966 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| || ||||| || ||||| Sbjct 217965 TTCCCTGTCAGAGTCTTGACAAAGATCTGCAT 217934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357275458489460