Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq5 154 1e-31 seq16 140 3e-27 seq5570 132 4e-25 seq601 120 2e-21 seq214 116 3e-20 seq3399 114 1e-19 seq185 111 1e-18 seq265 107 2e-17 seq411 100 2e-15 seq26 96.9 3e-14 seq43 95.1 1e-13 seq1395 91.5 1e-12 seq115 87.8 1e-11 seq14 87.8 1e-11 seq111 86.0 5e-11 >seq5 Length=3255894 Score = 154 bits (170), Expect = 1e-31 Identities = 530/815 (65%), Gaps = 11/815 (1%) Strand=Plus/Minus Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCAT 551838 |||||| ||| || |||||||||| || || ||||||||||| | |||| | || Sbjct 1196277 GCTACTGCTGGTGACACTCATCTTGGAGGAGAGGATTTTGATAACCGCATGGTCAACCAC 1196218 Query 551839 GGTGTGTTGAAGATTTTAAACGAAAAAACAAA-GTTGATCTATCTACATCTGCCAAAGCT 551897 | |||| | || || || |||| ||||| | ||| | | | | | | ||| Sbjct 1196217 --TTTGTTCAGGAGTTCAAGAGAAAGCACAAAAGGACATC-AGCGGTAACC-CTAGGGCT 1196162 Query 551898 CTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAA 551957 ||| | | || || || | || ||||| || || || |||| || || | |||| Sbjct 1196161 CTTAGGAGGCTCAGGACATCATGTGAAAGGGCAAAGAGAACTCTCTCCTCCACTGCTCAG 1196102 Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGG 552017 || ||||| || | || || || | |||||| ||||||| | || | ||| | || Sbjct 1196101 ACGACTATAGAGATTGACTCCTTGTATGAGGGCATTGATTTCTACACCACCATTACACGG 1196042 Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077 ||| |||||||| | || | || || || || || || || || || Sbjct 1196041 GCCCGTTTTGAAGAGCTAAACATGGACTTGTTCAGGAAGTGTATGGAGCCTGTTGAGAAA 1195982 Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137 ||| |||||| ||||||| || || || || ||||| |||| ||||||||||| Sbjct 1195981 TGTTTGAGAGATGCAAAGATGGACAAGAGCAGTGTCCATGATGTTGTCCTTGTTGGTGGG 1195922 Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATT 552196 || || |||||||||| | | | | | || ||| || |||||| ||| | || Sbjct 1195921 TCCACCAGAATTCCTAGGGTGCAGCAGCTACTGCAGGACTTCTT-CAATGGGAAAGAGTT 1195863 Query 552197 AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256 ||||| | ||||| || ||||||||||| |||||||| || | || || || || Sbjct 1195862 GTGCAAAAGTATCAATCCTGACGAGGCTGTTGCTTATGGTGCTGCTGTGCAGGCTGCCAT 1195803 Query 552257 TCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 | ||| | |||| || |||| | | |||| | ||||| ||||| || Sbjct 1195802 CTTGAGTGGTGAGGGCAATGAGAAGGTACAGGACCTGCTACTGTTGGATGTCACTCCACT 1195743 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 |||||||| || || || | ||| || | ||||| | | || || || || || Sbjct 1195742 TTCTCTTGGCTTGGAGACTGCTGGTGGAGTAATGACCGTTTTGATACCAAGGAACACCAC 1195683 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 ||||| || || | || || || || || || || || ||| ||| ||| Sbjct 1195682 CATTCCCACCAAGAAGGAGCAGGTCTTCTCAACCTACTCTGACAACCAACCTGGTGTCCT 1195623 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTT 552496 |||||| ||| ||| || ||||||| |||| ||||| |||| ||||| | || Sbjct 1195622 GATTCAAGTTTATGAGGGTGAAAGAACCAGGACTAGGGATAACAATCTTCTTGGAAAATT 1195563 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCG 552555 | | | || ||||| ||||||||| | || || || || ||| || | |||| | Sbjct 1195562 TGAGCTCTCTGGCATTCCGCCTGCTCCTAGGGGGGTTCCACAGATTACTGTCTGCTTT-G 1195504 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 |||| ||||| ||||| || ||||||| ||||| Sbjct 1195503 ATATTGATGCTAATGGTATCCTGAATGTCTCTGCT 1195469 Score = 107 bits (118), Expect = 2e-17 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 || || ||| || ||||| ||||||| ||||||||||| ||||| |||||| ||| || Sbjct 1196610 AAGCAGTTTGCAGCAGAAGAAATTTCTTCTATGGTTTTGATGAAGATGAAAGAAATTGCT 1196551 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 || | | ||| |||| | |||| || | ||||| || || || || || Sbjct 1196550 GAGGCCTACTTGGGTTCCACTGTTAAGAATGCTGTTGTTACTGTTCCTGCTTACTTCAAC 1196491 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 || || || || || || || || |||||||| |||| |||| || ||||| | | Sbjct 1196490 GATTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTTATTTCTGGTCTCAATGTAATGAGA 1196431 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || |||||||| || || || ||||| |||| ||||| || ||||| Sbjct 1196430 ATCATCAATGAGCCCACGGCAGCTGCCATTGCTTATGGTCTAGATAA 1196384 >seq16 Length=2636605 Score = 140 bits (154), Expect = 3e-27 Identities = 461/703 (66%), Gaps = 14/703 (2%) Strand=Plus/Plus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 |||||| | | || || || ||||| || || || || | | ||||||||| | | Sbjct 835862 GCTCTTAGGAGGCTGAGGACAGCTTGTGAGAGGGCGAAGAGGACCCTTTCATCTACTGCC 835921 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTA-TAATACGCCTATTTC 552013 |||||||| ||||| | ||||| | | |||||| || |||| || | | || || | Sbjct 835922 CAAACCACAATTGAGATTGATTCCCTGTATGAGGGCATCGATTTCTACTCCACC-ATCAC 835980 Query 552014 GAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGA 552073 | |||| |||||||| || |||||||| || || || || || ||||| Sbjct 835981 CCGTGCCAGGTTTGAAGAGCTTAACATGGATCTCTTCAGGAAGTGCATGGAGCCCGTAGA 836040 Query 552074 ACAAGTTT-TAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTG 552132 |||| | | || ||||| || || ||||| | || |||||| |||| ||||||| Sbjct 836041 G-AAGTGTCTGAGGGATTCCAAAATGGATAAGAGTAGCGTCCATGAAGTTGTCCTTGTTG 836099 Query 552133 GTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAA 552191 |||| || || |||||||| | | | | |||| || || ||| ||||| || Sbjct 836100 GTGGCTCCACTAGAATTCCGAGGGTGCAGCAGTTGTTGCAGGATTTCTTT-AATGGGAAG 836158 Query 552192 AAATTAAATGAAAG--TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 | || ||| ||| | | || || || ||||| || || ||||| || || | || | Sbjct 836159 GAGTT--ATGCAAGAATATCAACCCTGACGAGGCAGTGGCTTATGGGGCTGCTGTGCAGG 836216 Query 552250 CAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTA 552309 | || ||| | ||| | | |||| || | || || || | || | ||||||| Sbjct 836217 CTGCCATTTTGAGTGGCGAGGGTAATGAGAAGGTGCAGGATCTTCTTCTGTTGGATGTTA 836276 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA--TCGATAG 552367 |||| || || ||||| | || || | |||||| | |||||| ||||| || | || Sbjct 836277 CTCCCCTGTCCCTTGGACTGGAGACTGCAGGAGGTGTCATGACT-GTCTTAATTCCA-AG 836334 Query 552368 AAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAAC 552427 ||| || || ||||| || || | || || ||||| || || || || || | Sbjct 836335 AAACACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCTACTTACTCTGACAACCAGCC 836394 Query 552428 TGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACT 552487 || ||| |||||| ||| |||||| || || || | || || |||| || Sbjct 836395 TGGTGTGCTGATTCAAGTTTATGAAGGTGAGAGGGCCAGGACCAGGGACAACAATCTCCT 836454 Query 552488 TGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 ||||| ||| | | || |||||||| ||||| | || || || || ||| || Sbjct 836455 TGGTAAATTTGAGCTCTCCGGCATTCCTCCAGCTCCAAGGGGTGTTCCTCAGATTACGGT 836514 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 | || || || ||||||||||| || |||| || ||||| Sbjct 836515 TTGCTTTGACATTGATGCCAATGGTATCCTGAACGTCTCTGCT 836557 Score = 107 bits (118), Expect = 2e-17 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 || || || || |||| | |||||||| ||||| | ||||| |||||| | | || Sbjct 649790 AAGCAGTTCTCTGCAGAGGAGATTTCATCCATGGTCCTCATGAAGATGAAAGAGATTGCT 649849 Query 550370 AGTGCTTTTGTTGGT-CAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428 || | ||||| | | | ||| | | ||||| | || || || || || || || Sbjct 649850 GAAGCCTACCTTGGTTCTACTA-TTAAGAACGCAGTTGTTACAGTCCCTGCCTACTTCAA 649908 Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488 ||||| || ||||| || || ||||||||||| ||| |||| || |||||| | || Sbjct 649909 CGACTCCCAGCGTCAGGCCACCAAAGATGCTGGTGTCATTTCTGGCCTCAATGTTATGCG 649968 Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||||||| || || |||||||| |||| ||||| ||||| || Sbjct 649969 AATTATCAATGAGCCAACCGCTGCTGCCATTGCCTATGGTCTTGACAA 650016 >seq5570 Length=48003 Score = 132 bits (146), Expect = 4e-25 Identities = 256/372 (69%), Gaps = 7/372 (2%) Strand=Plus/Minus Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 ||||||| | ||||| || ||||| ||||| ||| | || | |||| | |||| || Sbjct 8035 ATACTATGTCAGATGCAAAGCGTTTGATTGGCAGACGCTTCAGTGATGCTTCTGTAAAGA 7976 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACCTTATATTG 550286 || ||||||| ||||| || | ||| || | ||| || |||| |||| Sbjct 7975 ATGACATGAAGCTATGGCCCTTTAAGGCGGTTGCTGGCCCCGGAGATAAGCCTTTGATTG 7916 Query 550287 AAG-CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | | | || | || | ||||||||| | ||||| |||| || |||||||| Sbjct 7915 CTGTCCAAT-ATAAGGGGGAGGAGAAACAATTTGCTGCAGAAGAAATATCCTCTATGGTG 7857 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG-TCAAGAAGTTACGGATGCAGT 550404 | ||||||||| ||| | |||| |||| || | | |||| | |||| || Sbjct 7856 CTGATGAAAATGCGCGAAATTTCGGAGGCTTACCTTGGCTCTACA-GTTAAGAATGCTGT 7798 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | ||||| || || || || |||||||||||||| |||||||| || |||||||| Sbjct 7797 TGTTACTGTCCCTGCTTACTTCAATGACTCACAACGGCAAGCTACAAAGGATGCTGGTGT 7738 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||| || || ||||| | ||||| || ||||| || || |||||||| |||| || Sbjct 7737 CATTGCAGGCCTCAATGTCATGCGTATCATTAATGAGCCCACAGCTGCTGCCATTGCTTA 7678 Query 550525 TGGACTTGATAA 550536 ||| ||||| || Sbjct 7677 TGGTCTTGACAA 7666 >seq601 Length=434630 Score = 120 bits (132), Expect = 2e-21 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | ||||| | || || || ||||| || |||||||||||| | ||| || Sbjct 408047 GTTACTAAAGCAGTGGTTACAGTTCCTGCATACTTCAATGACTCACAAAGGACAGCAACG 408106 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || |||||||| ||||||||||| || | |||||||| || || |||||||||||||| Sbjct 408107 AAGGATGCTGGTCGTATTGCTGGTCTAGAAGTTCTTCGCATCATTAATGAACCTACTGCC 408166 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 || |||| ||||||||| |||| || Sbjct 408167 GCATCACTGGCATATGGATTTGAAAA 408192 >seq214 Length=993088 Score = 116 bits (128), Expect = 3e-20 Identities = 114/146 (78%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | |||||| | || || || ||||| || |||||||| ||| | ||| || Sbjct 895023 GTTACAAAAGCAGTAGTCACAGTGCCTGCATACTTCAATGACTCTCAAAGGACAGCAAC- 895081 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 ||||||||||| || |||||||| | ||||||||||||||||||||||||| || ||| Sbjct 895082 AAAGATGCTGGTCGCATTGCTGGTTTGGATGTTCTTCGTATTATCAATGAACCCACAGCT 895141 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 || || | |||||||| |||| || Sbjct 895142 GCATCATTGGCATATGGTTTTGAGAA 895167 >seq3399 Length=65521 Score = 114 bits (126), Expect = 1e-19 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | || || |||||||| || |||||||| ||| | ||| || Sbjct 30655 GTTACTAAAGCGGTTGTCACAGTTCCAGCATACTTCAATGACTCTCAAAGGACAGCAACA 30596 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 ||||||||||| ||||||||||| | | ||||||||||||||||||||||| || ||| Sbjct 30595 AAAGATGCTGGTCGTATTGCTGGTTTGGAAGTTCTTCGTATTATCAATGAACCCACAGCT 30536 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 || || | |||||||| |||| || Sbjct 30535 GCATCATTGGCATATGGTTTTGAGAA 30510 >seq185 Length=1049115 Score = 111 bits (122), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||||||||| || ||||| ||| ||||||||||| | | |||||| | Sbjct 462119 AGTTATTGGTATAGATTTGGGCACCACCTATTCATGTGTTGGTGTGTACAAGAATGGTCA 462060 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| || |||||||| ||||| ||| | | ||| ||||| | || ||||||| Sbjct 462059 TGTAGAAATCATAGCCAATGACCAAGGGAACCGTATTACACCATCCTGGGTGGCTTTCAC 462000 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || ||| ||||||| || ||||| | || || || ||| | | Sbjct 461999 TGATACCGAGAGATTAATTGGTGAGGCTGCAAAGAACCAGGCAGCTTTAAATGCGGAGAG 461940 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAA-GAAGT 550207 || |||||||||| |||| | | ||||||| ||||| Sbjct 461939 GACGATTTTTGATGTTAAAAGGCTTATTGGAAGGAAGT 461902 >seq265 Length=782298 Score = 107 bits (118), Expect = 2e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || ||||| ||||||||||| ||||| | || || || ||||| |||||||| Sbjct 316057 GCAGTGATTACTGTTCCAGCATATTTCAATGATGCTCAGCGACAGGCTACAAAAGATGCA 315998 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| | |||||||| ||| |||| | | || || |||||||| |||||||| ||||| Sbjct 315997 GGAAGAATTGCTGGCCTTGATGTACAGAGAATCATTAATGAACCCACTGCTGCAGCACTA 315938 Query 550520 GCATATGGACTTGATAA 550536 | |||||| | |||| Sbjct 315937 TCTTATGGAATGAATAA 315921 Score = 96.9 bits (106), Expect = 3e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765 ||||||| || || ||||| || ||||| ||||| ||| | |||| || || || Sbjct 315930 CCATAAGATAGTGCTGCAGCAGTGGGTTCATTAATGATTCTCTGTACATCAAGGCCAGCA 315989 Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825 ||| || ||||||| || || || || || |||||||| |||||||| ||||||||| Sbjct 315990 ATTCTTCCTGCATCTTTTGTAGCCTGTCGCTGAGCATCATTGAAATATGCTGGAACAGTA 316049 Query 361826 ATCACTGCTTT 361836 ||||||||||| Sbjct 316050 ATCACTGCTTT 316060 >seq411 Length=610260 Score = 100 bits (110), Expect = 2e-15 Identities = 130/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 550352 AAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 |||||||| | || || ||| ||| | ||||| || ||| | | || || || || Sbjct 95255 AAAATGAAGGAGACGGCAGAGT-CTTATCTTGGTAAAAGTGTTTCCAAGGCTGTCATCAC 95313 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 || || || |||||||| || | || ||||| || || || ||||||||| | ||||| Sbjct 95314 AGTTCCTGCTTATTTTAACGATGCGCAGCGTCAGGCCACAAAGGATGCTGGAAGAATTGC 95373 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| | || || | ||||||||||| ||||| || ||||| ||| ||||||| Sbjct 95374 TGGACTGGAGGTACTCAGGATTATCAATGAGCCTACGGCCGCTGCTCTTTCATATGG 95430 >seq26 Length=2273700 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| ||||| || | || ||||| ||| || ||| || |||||||| | || | Sbjct 442547 GAGCCGGAGGACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAATGTACG 442488 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| ||||| || || || ||||| || || || ||||| || ||||||||||| || Sbjct 442487 GCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATTCCCTC 442428 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 || ||||| |||||| ||| || ||||||||||||| | | ||| || || Sbjct 442427 CTTGTCTTGGATTTTTGCTTTAACATTGTCAATTGTATCAGAGCTCTCAACTTCTAGGGT 442368 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || |||||||| | |||||| || || |||||| Sbjct 442367 GATGGTCTTTCCAGTAAG-GGTTTAAC-AATATCTGCATA 442330 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/136 (77%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || ||||| ||||||||||| || ||| | ||| ||||| || || || | ||| | Sbjct 442999 AGGCGGAGGACAAGATGAAGAGTGGACTCCTTCTGG--ATATTATAGTCCGCCAAAGTAC 442942 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||| ||||| || ||||| |||||| |||||||| |||||||||||||||| |||| Sbjct 442941 GCCCATCCTCAAGCTGCTTTCCAGCAAAA-TAAGTCTT-GCTGATCAGGAGGAATACCTT 442884 Query 563375 CTTTATCTTGAATTTT 563390 | |||||||| || || Sbjct 442883 CCTTATCTTGGATCTT 442868 >seq43 Length=1757131 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | || || || || || || ||||||||||| || || || || || |||| Sbjct 357782 ATGCTGTGGTCACCGTCCCTGCTTACTTCAATGACTCACAGCGGCAGGCCACCAAGGATG 357723 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || || ||||| || ||||| | ||||| |||||||| || || |||||||| Sbjct 357722 CCGGTGTCATCGCTGGCCTCAATGTCATGCGTATCATCAATGAGCCCACAGCTGCTGCCA 357663 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| ||||||||| Sbjct 357662 TTGCCTATGGTCTTGATAAA 357643 >seq1395 Length=207993 Score = 91.5 bits (100), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG-TCAAGA 550389 || ||||| ||||| | ||||| ||||| | | || || | | |||| || | Sbjct 123367 ATCTCATCCATGGTCCTCATGAAGATGAAGGAGATCGCTGAGGCCTATCTTGGCTCTACT 123426 Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449 | ||| | | ||||| | || || || || || || |||||||| || || || || || Sbjct 123427 A-TTAAGAACGCAGTGGTCACAGTCCCGGCCTACTTCAATGACTCCCAGCGCCAGGCCAC 123485 Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509 ||||||||||| |||| |||| || ||||| | || |||||||| ||||| || || Sbjct 123486 CAAAGATGCTGGTGTTATTTCTGGCCTCAATGTCATGCGAATTATCAACGAACCCACCGC 123545 Query 550510 TGCTGCACTTGCATATGGACTTGATAA 550536 |||||| | || ||||| || || || Sbjct 123546 TGCTGCCATCGCCTATGGCCTCGACAA 123572 >seq115 Length=1247576 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765 ||||||| ||||| ||||| || ||||| ||||| ||| | |||| || || || Sbjct 466638 CCATAAGATAATGCTGCAGCAGTGGGTTCATTAATGATTCTCTGTACATCAAGGCCAGCA 466697 Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825 ||| || |||||| || || || || || ||||| || |||||||| ||||||||| Sbjct 466698 ATTCTTCCCGCATCTTTTGTAGCCTGTCGCTGAGCATCGTTGAAATATGCCGGAACAGTA 466757 Query 361826 ATCACTGCTTT 361836 |||||||| || Sbjct 466758 ATCACTGCCTT 466768 >seq14 Length=2706328 Score = 87.8 bits (96), Expect = 1e-11 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 550373 GCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGAC 550432 |||| | ||||| || ||| | | || || || || || || || || |||||||| Sbjct 2162233 GCTTATCTTGGTAAAACTGTTTCCAAAGCTGTCATCACAGTTCCTGCCTACTTTAATGAT 2162292 Query 550433 TCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATT 550492 | ||||| || || || || ||||| || | ||||||||||| |||| || | ||| Sbjct 2162293 GCCCAACGCCAGGCGACAAAGGATGCCGGGAGAATTGCTGGACTGGATGTGCTGAGGATT 2162352 Query 550493 ATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||||| ||||| ||||| || ||| | |||||| Sbjct 2162353 ATTAATGAGCCTACGGCTGCAGCTCTTTCGTATGGA 2162388 >seq111 Length=1279311 Score = 86.0 bits (94), Expect = 5e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| || |||||| | || |||||||| ||||||||||| | | |||||| | Sbjct 164606 AGTTATTGGGATAGATCTTGGTACCACATACTCATGTGTTGGTGTCTATAAGAATGGTCA 164547 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || || || ||||| ||||| || | | ||| ||||| | || | ||||| Sbjct 164546 TGTGGAGATCATAGCAAATGACCAAGGAAATCGTATTACCCCATCATGGGTGGCATTCAC 164487 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || | || || | ||||| || |||||| |||| ||| ||| ||| || | Sbjct 164486 TGATAGCGAGAGACTAATAGGTGAGGCTGCAAAAAATCAGGCCGCTGCAAATGCTGAAAG 164427 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAA 550205 || |||||||||| ||| | | ||||| |||| Sbjct 164426 AACCATTTTTGATGTCAAAAGACTTATTGGGAGAA 164392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027881022050440