Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq782 86.0 5e-12 >seq782 Length=366579 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 ||||| ||||| | ||| ||||||||| ||| | || || || || ||||| |||||| Sbjct 137962 GACAAGGAGGGTATACCCCCAGATCAACAAAGATTGATTTTCGCTGGAAAACAGTTGGAA 138021 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| ||| |||| ||||| |||||||||||||| || || |||| |||| ||| Sbjct 138022 GATGGCCGAACCTTGGCTGATTACAACATTCAAAAAGAGTCAACATTGCATCTGGTTTTA 138081 Query 28767 AG 28768 || Sbjct 138082 AG 138083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425266080280524