Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq5570 131 1e-24 seq265 127 1e-23 seq4 113 3e-19 seq115 111 1e-18 seq26 107 1e-17 seq3399 105 4e-17 seq16 105 4e-17 seq297 102 5e-16 seq5 102 5e-16 seq43 98.7 6e-15 seq601 96.9 2e-14 seq185 96.9 2e-14 seq167 96.9 2e-14 seq411 89.7 3e-12 >seq5570 Length=48003 Score = 131 bits (144), Expect = 1e-24 Identities = 446/683 (65%), Gaps = 14/683 (2%) Strand=Plus/Minus Query 475490 CTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTT 475549 || || |||||||||||| | || || || || | || ||| || | ||||| || | Sbjct 7434 CTGAGGACTGCTTGTGAAAGGGCAAAAAGAACTTTATCATCTACTGCCCAAACCACAATC 7375 Query 475550 GAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTT--ATTACAAGGGCTAAAT 475607 || |||||||||| |||||||| ||||||| ||||| || || | || | | Sbjct 7374 GAGATTGATTCTCTATTTGAAGGCATTGATTTC--TACTCAACCATCACCCGTGCAAGGT 7317 Query 475608 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCA 475667 | || || | ||||| || | ||| || || || |||||| || || | Sbjct 7316 TCGAGGAACTCAACATGGATCT-TTCAAAAAGTGCATGGAGCCTGTTGAAAAATGCCTGA 7258 Query 475668 GAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAA 475727 |||||||||| | | ||| |||||||||| |||||||||| || || ||||| | Sbjct 7257 GAGATTCTAAGATGGCCAAGAGTTCAGTCCATGAAGTTGTTCTTGTTGGTGGATCAACCA 7198 Query 475728 GAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAA 475786 | || || | | | || ||||| || || | || ||||| || | | | | Sbjct 7197 GGATACCCAGAGTCCAGCAACTGCTT-CAGGATTTCTTCAATGGGAAGGAACTCTGTAAG 7139 Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCA 475846 ||| | || ||||||||||||||||||||||| |||||||| || || || || || Sbjct 7138 AGTATCAACCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCCGCCATCTTGAGT 7079 Query 475847 GGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTA 475906 ||| | | | ||| | | | || | | | || || ||||| ||||| | Sbjct 7078 GGTGAGGGCAATAAAAAAGTGCAGGACCTTCTGTTGCTGGATGTCACTCCTCTTTCCCTT 7019 Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTT-ATTGACAGAAATACTCCTATCCC 475965 || | || || | |||||| | ||||| | | || ||| || || || | ||||| Sbjct 7018 GGATTGGAGACTGCTGGAGGAGTCATGAC-AGTGTTGATTCCAAGGAACACCACCATCCC 6960 Query 475966 ATGCAAAAA--ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 ||| || ||| |||| || ||||| | || || |||||| | ||| ||| Sbjct 6959 TACCAAGAAGGATC--AAGTCTTCTCCACCAACTCCGACAATCAACCTGATGTCTTGATC 6902 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 || ||| ||| ||||| || || || || || ||| | | || | ||| | Sbjct 6901 AAAGTCTATGAGGGTGAGAGGGCGAGGACGAAGGACAACAACCTAGTAGGGAAATTTGAG 6842 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 ||| || || | |||||||| || || || |||||||| || ||||||||| Sbjct 6841 CTTTCTGGGATCTCGCCTGCTCCAAGGGGTGTACCTCAAATCACTGTCTGCTTTGATATT 6782 Query 476144 GATGCAAATGGTATTCTTAATGT 476166 ||| | ||||||||| ||||||| Sbjct 6781 GATTCCAATGGTATT-TTAATGT 6760 Score = 113 bits (124), Expect = 3e-19 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || ||||||| || || || || ||||| || ||||| ||||| || || |||| Sbjct 7804 ATGCTGTTGTTACTGTCCCTGCTTACTTCAATGACTCACAACGGCAAGCTACAAAGGATG 7745 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||||| || ||||| | ||||| |||||||| || ||||| || || Sbjct 7744 CTGGTGTCATTGCAGGCCTCAATGTCATGCGTATCATTAATGAGCCCACAGCTGCTGCCA 7685 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA 474884 |||||||||||||||| ||||| ||| || Sbjct 7684 TTGCTTATGGTCTTGACAAGAAGGCTGGCA 7655 >seq265 Length=782298 Score = 127 bits (140), Expect = 1e-23 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 474680 GTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCA 474739 ||| || |||| ||||| |||| || || || ||||| || || || | ||| Sbjct 316114 GTTCTAACCAAGATGAAGGAAACTGCTGAATCTTACCTTGGGAAATCTGTTTCTAAAGCA 316055 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||||||||||||||| |||||| |||| || || || || |||||||| ||| Sbjct 316054 GTGATTACTGTTCCAGCATATTTCAATGATGCTCAGCGACAGGCTACAAAAGATGCAGGA 315995 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 |||||||| || ||| |||| | || ||||||||||| || || || ||||| || Sbjct 315994 AGAATTGCTGGCCTTGATGTACAGAGAATCATTAATGAACCCACTGCTGCAGCACTATCT 315935 Query 474860 TATGG 474864 ||||| Sbjct 315934 TATGG 315930 >seq4 Length=3455462 Score = 113 bits (124), Expect = 3e-19 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || ||||| |||||| ||| || | |||||||||||| || || Sbjct 2201277 ACGAAGGCGGAGGACGAGATGGAGTGTAGATTCCTTCTGGATATTATAATCAGCCAGGGT 2201336 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || |||||||| || ||||| || || | || || || || |||||||| Sbjct 2201337 GCGGCCATCCTCCAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG-GGAATTCC 2201395 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||||| ||||| |||||| ||||| || |||| | | | | || | Sbjct 2201396 CTCCTTGTCTTGGATCTTAGCCTTGACATTATCAATGGTGTCAGAGCTCTCGA-CCTCCA 2201454 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || ||||| ||||| ||||| || || Sbjct 2201455 GGGTGATGGTCTT-CCCGTGAGGGTCTTCACGAAGATCTG 2201493 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || | ||||| ||| || || | |||||||| || || || Sbjct 2201049 ACGGAGGCGGAGCACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAATCCGCCAGGGT 2201108 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || ||||||||||||||||| || | ||| || || || |||||||| || Sbjct 2201109 GCGGCCATCCTCCAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCC 2201168 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| ||||| || || || ||||| || || | | | | | |||| Sbjct 2201169 TTCCTTGTCCTGAATTTTAGCCTTCACGTTGTCAATCGTGTCCGAGCTCTCGA-CCTCAA 2201227 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| ||||| || || || || Sbjct 2201228 GAGTGATGGTCTTCCCAGTGAGGGTCTTGACAAAGATCTG 2201267 >seq115 Length=1247576 Score = 111 bits (122), Expect = 1e-18 Identities = 131/176 (74%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 || ||||| |||| || || |||||||| || || || | ||||| |||||| Sbjct 466812 AAGATGAAGGAAACTGCTGAATCTTATCTTGGGAAATCTGTT-CTAAGGCAGTGATTACT 466754 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| |||||||| || ||| |||| || || || || |||||||||||||||||||| Sbjct 466753 GTTCCGGCATATTTCAACGATGCTCAGCGACAGGCTACAAAAGATGCGGGAAGAATTGCT 466694 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || ||| |||| | || ||||||||||| || || || ||| | ||||||| Sbjct 466693 GGCCTTGATGTACAGAGAATCATTAATGAACCCACTGCTGCAGCATTATCTTATGG 466638 >seq26 Length=2273700 Score = 107 bits (118), Expect = 1e-17 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| ||||||||||| || || || | |||||| || || | ||| Sbjct 443003 ACGAAGGCGGAGGACAAGATGAAGAGTGGACTCCTTCTGGATATTATAGTCCGCCAAAGT 442944 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| ||||||||||| |||||||| | ||| |||||||||||||| || Sbjct 442943 ACGCCCATCCTCAAGCTGCTTTCCAGC-AAAATAAGTC-TTGCTGATCAGGAGGAATACC 442886 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||| ||||| ||||| |||||| || || || || | | | | | ||| | Sbjct 442885 TTCCTTATCTTGGATCTTGGCCTTGACATTATCGATGGTGTCCGAGCTCTCCA-CTTCTA 442827 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| ||||| || || || || Sbjct 442826 GAGTGATGGTCTTCCCAGTGAGGGTCTTCACAAAGATCTG 442787 Score = 104 bits (114), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || ||||| |||||||| || || ||||| || || || ||||| || || | Sbjct 441591 AGTCGGAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAGTCAGCCAGTGTGCGA 441532 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| ||||| || || || || |||||||| | ||||| || ||||| || || ||| Sbjct 441531 CCATCCTCAAGCTGTTTGCCGGCGAAAATAAGCCTCTGTTGGTCTGGAGGGATGCCCTCC 441472 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 |||||||| ||||| || ||| || || ||||||| | | | ||||||||| Sbjct 441471 TTGTCTTGGATCTTGGCCTTCACATTATCGATTGTATCAGAGCTTTCAACTTCAAGGGTG 441412 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||||||||| || || || Sbjct 441411 ATGGTCTTGCCAGTCAGAGTCTTAACAAAGATCTG 441377 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || || ||||||||||| || |||||| | || || || ||||| || Sbjct 490970 ACGAAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGCTAGGGT 490911 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| ||||| ||||||||||| || | || || |||||||| || || Sbjct 490910 ACGCCCATCCTCAAGCTGCTTACCAGCAAAAATGAGCCTCTGCTGGTCAGGAGGGATCCC 490851 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| || ||||| |||||| || || || || | | | | | || ||| Sbjct 490850 TTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATGGTGTCCGAGCTCTCCACTTCCAA 490791 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| || ||||| || Sbjct 490790 -AGTGATGGTCTTCCCAGTGAGGGTCTTCACAAAAATCTG 490752 Score = 100 bits (110), Expect = 2e-15 Identities = 151/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || | || || || ||| || || ||||||||||| | || Sbjct 442550 ACGGAGCCGGAGGACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAATGT 442491 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| ||||| ||||| |||||||| || || | || || || ||||||||||| Sbjct 442490 ACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATTCC 442431 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||||| || ||| ||| ||| ||||| ||||||| | | | || ||| | Sbjct 442430 CTCCTTGTCTTGGATTTTTGCTTTAACATTGTCAATTGTATCAGAGCTCTCAA-CTTCTA 442372 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760 |||| || || || || || || || ||||| Sbjct 442371 GGGTGATGGTCTTTCCAGTAAGGGT-TTAAC 442342 >seq3399 Length=65521 Score = 105 bits (116), Expect = 4e-17 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 474720 GACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTC 474779 |||||| || ||| | || || | || ||||||||||| || ||||| |||||| | Sbjct 30661 GACAAG--GTTACTAAAGCGGTTGTCACAGTTCCAGCATACTTCAATGACTCTCAAAGGA 30604 Query 474780 AAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAAC 474839 |||||| |||||||| || | ||||| ||| | | ||| | |||||||| ||||||| Sbjct 30603 CAGCAACAAAAGATGCTGGTCGTATTGCTGGTTTGGAAGTTCTTCGTATTATCAATGAAC 30544 Query 474840 CAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | ||||| || || | || |||||| |||| ||||| Sbjct 30543 CCACAGCTGCATCATTGGCATATGGTTTTGAGAAGAA 30507 Score = 89.7 bits (98), Expect = 3e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 476068 ACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGA 476127 |||||||| || |||||| || |||||||| || || |||| || || |||||||| Sbjct 24406 ACTTGGAAGCTTCCGTCTTGATGGAATTCCTCCAGCCCCACGAGGGGTCCCACAAATTGA 24347 Query 476128 AGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||| | |||||||||||||| || |||||||| ||||||||| ||||| Sbjct 24346 AGTCAAGTTTGATATTGATGCCAACGGTATTCTCTCAGTTACTGCTGTAGATAA 24293 >seq16 Length=2636605 Score = 105 bits (116), Expect = 4e-17 Identities = 133/183 (73%), Gaps = 10/183 (5%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||| || || || || ||||| || || || || ||||| || |||| Sbjct 835504 ATGCTGTTGTCACTGTACCTGCCTACTTCAATGACTCCCAGCGCCAGGCAACAAAGGATG 835563 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| ||||| || ||||| ||| | || ||||| || ||||| ||||| || || Sbjct 835564 CTGGAGTTATTGCTGGCCTTAACGTTATGCGAATTATCAACGAACCCACAGCTGCTGCTA 835623 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTT 474906 |||| ||||||||||||||||| ||| || ||||| |||||| | ||||| Sbjct 835624 TTGCATATGGTCTTGATAAGAAGGCTGCCAGTGTTGGTGAGAAG--AATGTTCTTATCTT 835681 Query 474907 TGA 474909 ||| Sbjct 835682 TGA 835684 Score = 91.5 bits (100), Expect = 1e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 ||||| |||| || || || || || || || || || ||||| || || |||||||| Sbjct 649880 GCAGTTGTTACAGTCCCTGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAAGATGCT 649939 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || ||| | || || |||||| | || ||||| ||||| ||||| || || || || Sbjct 649940 GGTGTCATTTCTGGCCTCAATGTTATGCGAATTATCAATGAGCCAACCGCTGCTGCCATT 649999 Query 474857 GCTTATGGTCTTGATAAGAATTCTGACA 474884 || ||||||||||| ||||| ||| || Sbjct 650000 GCCTATGGTCTTGACAAGAAGGCTGGCA 650027 >seq297 Length=752846 Score = 102 bits (112), Expect = 5e-16 Identities = 131/177 (74%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || || || | ||| |||||||||||||||||||| |||||||| || Sbjct 218111 TTGTAATCTGCCAGCGTGCGTCCATCCTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGC 218052 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || ||||| |||||||||||||| ||||||||| |||||| ||||| || || Sbjct 218051 TGGTCTGGAGG-ATTCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATGGTGTCG 217993 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | | | ||| || || || || || || |||||||| || || || || Sbjct 217992 GAGCTCTCCACCTCCAA-AGTGATCGTCTTCCCTGTCAGAGTCTTGACAAAGATCTG 217937 >seq5 Length=3255894 Score = 102 bits (112), Expect = 5e-16 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705 || || ||| || | ||| |||||||||| |||||||| || |||||| ||| || Sbjct 1196610 AAGCAGTTTGCAGCAGAAGAAATTTCTTCTATGGTTTTGATGAAGATGAAAGAAATTGCT 1196551 Query 474706 GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764 ||| | || ||||| | || | |||| || |||||||||| || || || | Sbjct 1196550 GAGGCC-TA-CTTGGGTTCCACTGTTAAGAATGCTGTTGTTACTGTTCCTGCTTACTTCA 1196493 Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824 | |||||||| || || || || || ||||| || ||| | ||||| ||||| | Sbjct 1196492 ACGATTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTTATTTCTGGTCTCAATGTAATGA 1196433 Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || || ||||| || || ||||| || ||||||||||||| |||||||| Sbjct 1196432 GAATCATCAATGAGCCCACGGCAGCTGCCATTGCTTATGGTCTAGATAAGAA 1196381 Score = 95.1 bits (104), Expect = 8e-14 Identities = 360/554 (65%), Gaps = 11/554 (2%) Strand=Plus/Minus Query 475625 GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGA 475683 ||||| || || || || || ||||| || |||| ||| || ||| |||| | || Sbjct 1267861 GATCTGTTCAGGAAGTGCATGGAGCCCGTCGAG-AAGTGTCTGAGGGATGCTAAGATGGA 1267803 Query 475684 CAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAA 475742 ||| | || | ||||||| ||||||| || || ||| | ||||| ||||| || | Sbjct 1267802 CAAGAGCAGCA-TCCATGACGTTGTTCTCGTCGGGGGT-CGACAAGGATTCCCAAGGTGC 1267745 Query 475743 GAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTG 475799 | || || || | | || ||||| || || | || ||| | | ||||||| Sbjct 1267744 AGCAGCTG-TTGCAGGACTTCTTCAATGGGAAGGAGCTC--TGCAAGAGCATCAATCCTG 1267688 Query 475800 ATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACG 475859 |||| || ||||| ||||| ||||| |||||||| || ||||| ||| || ||| Sbjct 1267687 ATGAGGCCGTTGCCTATGGTGCTGCCGTCCAAGCTGCGATTTTGAGCGGTGAAGGCAACG 1267628 Query 475860 AGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAG 475919 |||| | | | | | || | || || || || || || | || || || || | Sbjct 1267627 AGAAGGTGCAGGACCTGCTGCTGTTGGATGTCACCCCGCTCTCCCTTGGACTGGAGACCG 1267568 Query 475920 TTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAA 475979 |||||| | |||||| ||| ||| || || ||| | || || ||| || Sbjct 1267567 CTGGAGGAGTCATGACTGTTCTGATTCCGAGGAACACTACCATTCCCACCAAGAAGGAGC 1267508 Query 475980 AAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTG 476039 | || || ||||| || |||||||| || | ||| ||| || ||| || |||| Sbjct 1267507 AGGTCTTCTCCACCTACTCTGATAACCAGCCTGGTGTGCTCATTCAGGTCTACGAGGGTG 1267448 Query 476040 AAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTC 476099 | || | || || ||||| || || || | ||| | || || || |||| Sbjct 1267447 AGAGGACCAGGACGAAGGATAACAATTTGCTGGGCAAATTTGAGCTCTCTGGCATCCCTC 1267388 Query 476100 CTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTC 476159 |||| || ||||| || || || || | || || || || ||||| |||||||| | Sbjct 1267387 CTGCCCCAAGAGGTGTGCCCCAGATCAATGTCTGCTTCGACATCGATGCCAATGGTATCC 1267328 Query 476160 TTAATGTTACTGCT 476173 | ||||| |||||| Sbjct 1267327 TGAATGTGACTGCT 1267314 >seq43 Length=1757131 Score = 98.7 bits (108), Expect = 6e-15 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705 || || ||| || | ||| |||||||||| |||||||| || ||||| |||| || Sbjct 369198 AAGCAGTTTGCAGCAGAAGAAATTTCTTCGATGGTTTTGATGAAGATGAAGGAAACTGCA 369257 Query 474706 GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764 ||| | || ||||| | || | |||| || |||||||||| || | || | Sbjct 369258 GAGGCC-TA-CTTGGGTTCCACTGTTAAGAATGCTGTTGTTACTGTTCCTGCTTGCTTCA 369315 Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824 |||||||||| || || || || | ||||| || ||||| ||||| ||||| | Sbjct 369316 ATGATTCTCATCGCCAGGCTACCGAGGATGCTGGTGTTATTGCTGGTCTCAATGTCATGA 369375 Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || || ||||| || |||||||| || |||||| |||||| ||||| || Sbjct 369376 GAATCATCAATGAGCCCACAGCAGCTGCCATTGCTTTTGGTCTCGATAACAA 369427 Score = 98.7 bits (108), Expect = 6e-15 Identities = 252/381 (66%), Gaps = 2/381 (1%) Strand=Plus/Plus Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCA 475846 ||| | ||||||||||| |||||||| || || |||||||| || || || || || Sbjct 369918 AGTATCAATCCTGATGAGGCTGTTGCTTACGGTGCTGCTGTGCAGGCTGCCATCTTGAGC 369977 Query 475847 GGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACGTAACTCCACTTTCATT 475905 || | | ||||||| || | | || ||||| ||||| || ||||| || | Sbjct 369978 GGCGAGGGAAACGAGAAGGTACAGGA-CCTGCTGTTGTTGGACGTCACCCCACTCTCTCT 370036 Query 475906 AGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCC 475965 ||| | || || | |||||| | |||||| | | ||| || ||||| | || || Sbjct 370037 TGGTTTGGAGACTGCTGGAGGAGTAATGACTGTTTTGATTCCAAGGAATACCACCATTCC 370096 Query 475966 ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025 ||| || | || || || || || ||||| || ||| | ||| || || Sbjct 370097 CACCAAGAAGGAGCAGGTCTTCTCGACCTACTCTGACAACCAACCTGGTGTCCTGATTCA 370156 Query 476026 AATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCT 476085 | | ||| |||||||| | | |||| |||||| ||| ||||||| ||| | || Sbjct 370157 AGTTCATGAGGGTGAAAGGACAAGGACTAGAGATAACAACCTTCTTGGAAAATTTGAGCT 370216 Query 476086 TGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGA 476145 || ||||| || ||||| || || || || || || || |||||| || || Sbjct 370217 CTCTGGCATTCCACCGGCTCCTAGGGGCGTCCCGCAGATCAGTGTCTGTTTTGACATAGA 370276 Query 476146 TGCAAATGGTATTCTTAATGT 476166 ||| || |||||||| ||||| Sbjct 370277 TGCTAACGGTATTCTGAATGT 370297 >seq601 Length=434630 Score = 96.9 bits (106), Expect = 2e-14 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 474720 GACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTC 474779 |||||| || ||| | ||||| |||| ||||| ||||| || ||||| || ||| | Sbjct 408041 GACAAG--GTTACTAAAGCAGTGGTTACAGTTCCTGCATACTTCAATGACTCACAAAGGA 408098 Query 474780 AAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAAC 474839 |||||| || ||||| || | ||||| ||||| | ||| | || || |||||||||| Sbjct 408099 CAGCAACGAAGGATGCTGGTCGTATTGCTGGTCTAGAAGTTCTTCGCATCATTAATGAAC 408158 Query 474840 CAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || || || |||| || ||||| |||| ||||| Sbjct 408159 CTACTGCCGCATCACTGGCATATGGATTTGAAAAGAA 408195 >seq185 Length=1049115 Score = 96.9 bits (106), Expect = 2e-14 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| || || || || ||||| | ||| | | |||||| | ||| Sbjct 462115 ATTGGTATAGATTTGGGCACCACCTATTCATGTGTTGGTGTGTACAAGAATGGTCATGTA 462056 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || |||||||||||||| || | | |||||||| | || |||| ||||| Sbjct 462055 GAAATCATAGCCAATGACCAAGGGAACCGTATTACACCATCCTGGGTGGCTTTCACTGAT 461996 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510 || || | || | ||||| || ||||| || | || || || | ||| | | | || Sbjct 461995 ACCGAGAGAT-TAATTGGTGAGGCTGCAAAGAACCAGGCAGCTTTAAATGCGGAGAGGAC 461937 Query 474511 TATTTTTGATGCTAAAAGATTGATTGG 474537 |||||||||| |||||| | ||||| Sbjct 461936 GATTTTTGATGTTAAAAGGCTTATTGG 461910 Score = 89.7 bits (98), Expect = 3e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 || |||| || || |||||| |||| | || ||||| || ||||| || | || || | Sbjct 461428 TTTCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACCAAGGATGCCGGCATTATAGCTG 461369 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 || | |||||| | || || |||||||||||||| || || |||| |||||||||| Sbjct 461368 GTTTGAATGTTGCTAGGATAATAAATGAACCAACAGCTGCGGCTATTGCCTATGGTCTTG 461309 Query 474870 ATAAGAA 474876 ||||||| Sbjct 461308 ATAAGAA 461302 >seq167 Length=1102902 Score = 96.9 bits (106), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || ||||| || ||| ||||| | |||||||| || || || Sbjct 191355 ACGGAGGCGGAGCACCAGATGGAGAGTAGACTCTTTTTGGATGTTATAATCGGCGAGGGT 191414 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || |||||||||||||| || || || ||||| || || || || ||||| || Sbjct 191415 GCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATACC 191474 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||| ||||||||||| ||||| || || || || | | | | | | ||| Sbjct 191475 TTCCTTATCTTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAA 191534 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || |||||||| ||||| ||||| || || Sbjct 191535 -GGTGATGGTCTTGCCGGTGAGGGTCTTGACGAATATCTG 191573 >seq411 Length=610260 Score = 89.7 bits (98), Expect = 3e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 290827 ACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGC 290886 |||||||| | | ||| || || || ||||| ||||| || | ||| || || || || Sbjct 95431 ACCATATGAAAGAGCAGCGGCCGTAGGCTCATTGATAATCCTGAGTACCTCCAGTCCAGC 95372 Query 290887 AATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGT 290946 |||| || | | ||| || ||||| || |||||||| |||||||||||||| ||||| Sbjct 95371 AATTCTTCCAGCATCCTTTGTGGCCTGACGCTGCGCATCGTTAAAATAAGCAGGAACTGT 95312 Query 290947 AATAACAGCTTT 290958 || ||||| || Sbjct 95311 GATGACAGCCTT 95300 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 |||||||||| | || || ||| || |||||||| || || | | || || || Sbjct 95253 CCAAAATGAAGGAGACGGCAGAG-TCTTATCTTGGTAAAAGTGTTTCCAAGGCTGTCATC 95311 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || ||||| || |||||||| ||| | || ||||| || || || ||||| ||||||||| Sbjct 95312 ACAGTTCCTGCTTATTTTAACGATGCGCAGCGTCAGGCCACAAAGGATGCTGGAAGAATT 95371 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || | || | | ||||| ||||| || || || || || ||| | |||||| Sbjct 95372 GCTGGACTGGAGGTACTCAGGATTATCAATGAGCCTACGGCCGCTGCTCTTTCATATGGT 95431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267031505339888