Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2335 84.2 1e-11 >seq2335 Length=105124 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/226 (69%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 26060 AAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACT 26119 ||| ||||||| || || || || |||||||| || || | ||||| ||||| ||||| Sbjct 21860 AAATTACCTTT-CTCTTGCCACCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACC 21918 Query 26120 TTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTC 26179 ||||||||||||| | ||| | || || ||||| | | | || | || || Sbjct 21919 CTCAACATTGGAACGATGCCATTGGATGTCCCATTTGTCCCACGGATATAACTACCAGTT 21978 Query 26180 GATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA 26239 | | ||||| ||||||| || || | ||| ||||| |||| ||| | ||||| Sbjct 21979 GCACGAATATTGTGAGCAGATATGCCAACTCCTCCAGCAGATTTGCTTATAACAGCACAC 22038 Query 26240 TC--TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 || | ||| ||||| | || || | ||||||||| ||||||| Sbjct 22039 TCCTTTAAA--GTATCATATATGCCCTCAATGCTATCATCTTTCAT 22082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252957486502700