Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq85 96.9 4e-15 seq172 86.0 7e-12 >seq85 Length=1476802 Score = 96.9 bits (106), Expect = 4e-15 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 67735 TAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCAA 67794 || |||| ||||| ||||||||||| || || || || ||||||||||| ||||| || | Sbjct 645646 TACCAAG-GAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCCA 645588 Query 67795 GCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAA 67837 ||| || ||||| ||||||||||||||||| || |||||| Sbjct 645587 ACATGTGAAATGGATGCATAAGGATGTTGTGTTCCATTTGGAA 645545 >seq172 Length=1158115 Score = 86.0 bits (94), Expect = 7e-12 Identities = 99/130 (76%), Gaps = 5/130 (4%) Strand=Plus/Plus Query 67742 AGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTAC-TCCAAGCATAT 67800 |||| | |||||||||||||| || || || |||| |||| | ||| ||||| ||| | Sbjct 764508 AGAAACATGCATAGCACTAAATAGCGAGTCATCGAAAACACTAGTTACATCCAA-CATGT 764566 Query 67801 GGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTAC 67860 | ||| | | ||||||| ||||||| ||||||||||| || || ||||| |||||| Sbjct 764567 GAAATTGATTCATAAGGGTGTTGTGTTCTGCTTGGAATAC---AATCTAGTTGAAAGTAT 764623 Query 67861 CAGAAATACC 67870 || | || || Sbjct 764624 CAAATATTCC 764633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566757584508960