Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq26 93.3 8e-14 >seq26 Length=2273700 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | || || || ||||| | || | ||| || ||||||||||| | Sbjct 443009 ACCACCACGAAGGCGGAGGACAAGATGAAGAGTGGACTCCTTCTGGATATTATAGTCCGC 442950 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || || | ||| || | || ||||| |||||| | | ||| || ||||||||||| Sbjct 442949 CAAAGTACGCCCATCCTCAAGCTGCTTTCCAGCAAAA-TAAGTCT-TGCTGATCAGGAGG 442892 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| |||||||| || |||| || | ||| || || || || ||| || Sbjct 442891 AATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCGATGGTGTCCGAGCTCTCCAC 442832 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||| || || || || || || || || ||||| || ||||| Sbjct 442831 TTCTAGAGTGATGGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 442784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899353510585920