Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq518 98.7 3e-16 >seq518 Length=568097 Score = 98.7 bits (108), Expect = 3e-16 Identities = 207/306 (68%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 19396 CAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTC 19455 |||| || || ||| |||| ||||| | ||| ||||| ||||| || | || | || Sbjct 409472 CAAGTGGACGAAACTCATAATATTGTAGGTGCCCATGGTTATTT-GGCAGATTTGTCTTA 409414 Query 19456 CAGTACGCATCCTTCAACAATAGCCGTTCTCTA-CATTTCTTTTTGGCTGCTTGGCCTGT 19514 || || || ||||||||| |||| || ||||| |||||||||||||||| || Sbjct 409413 CAATATGCTAGTTTCAACAATTCTTGTTCCTTAACATTTATTTTTGGCTGCTTGGCTTGC 409354 Query 19515 GGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTT 19574 || || || | ||| | || | | | || || ||| | |||||| | ||||| || Sbjct 409353 AGTAGGTATCTAGTTAACTGCTTTACGTATCAGTACTATGACTTTCAACCTAAATGGTTT 409294 Query 19575 TAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACAT 19634 || | ||||| | | | ||||| | ||| ||| ||| | | | |||| || Sbjct 409293 CAATTCCAACCAAACTAATGTAGACAATCAGGGTTATGTTATTACCATCTAGACTGATAT 409234 Query 19635 TCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCC 19694 |||||| || ||| | | | || |||||| | ||| |||||||||| |||||||| Sbjct 409233 CATCAATCATGGTAAGTTTGATATGGAAGTAATGTATGAATGTAATGCTCACAACTTCCC 409174 Query 19695 ACTTGA 19700 || || Sbjct 409173 TCTAGA 409168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141103953144648