Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq26 84.2 2e-11 >seq26 Length=2273700 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/223 (69%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | |||||||| | | || || ||||||||||||||||| || || Sbjct 442777 ACGAAGGCGGAGGACCAAATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCTGCCAGCGT 442718 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| || ||||| ||||| | | |||| || ||||| |||||||| || ||||| Sbjct 442717 GCGCCCATCCTCCAGCTG-TTACCAGCAAAGATGAGCCGCTGCTGATCTGGTGGGATGCC 442659 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || ||||| ||||| || | | || | || || | ||| || |||| Sbjct 442658 CTCCTTATCCTGGATTTTAGCCTTTACATTGTCAATGGTGTCAGAGCTCTCTACCTCGAG 442599 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || ||||| || || |||| || ||||||||| Sbjct 442598 GGTGATGGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCATG 442556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476451797384160