Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq100 82.4 4e-11 >seq100 Length=1334691 Score = 82.4 bits (90), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 6/125 (5%) Strand=Plus/Plus Query 65120 TTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAAT--TGCT-GCATTTAAA 65176 || || ||||| ||||| ||||| ||||||||||| ||||| |||| ||| | | Sbjct 680514 TTTATGTTGTTGCTACCAACAAAATCTTGAGCCATTCCAATAATGGTGCTAGCA---AGA 680570 Query 65177 CTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACT 65236 ||| ||||| ||||| || |||||||||| || ||||| ||| |||||||||||| Sbjct 680571 CTCTGCTCACCATGATGGTAGGCTGAATGTTCCGAAACATAGCCAGCAAATTGAGCAACC 680630 Query 65237 TTTAT 65241 | ||| Sbjct 680631 TATAT 680635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235603147403400